Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01901 ATGTCACAAGATATTGCTACTTCACCAGTTCCCTTTGATTTTGAACTCTTGGTTGGTGATCCTGAGAACCTTAGGACGGTCAAAACCTCAGCCAGCCGCACAGACCCATGGATTGAACCTGAAAGGTTAAAACTCAGACACAGGATTGGTCGGGGACCCTTTGGTGATGTTTGGTTAGCAACTCATCATCAATCAACTGAAGATTATGATGAGTATCACGAAGTTGCTGCCAAGATGTTACCTCCAGTCAGAGAGGAACATAAGAAGACTGCATTGGAGAAATTTTTTGAATTGTATTTTCAGTGTCAAGGAGTGGCTAGGGTGTGCTGGCTACTTGGGATTTCAATTTTAAATGGAAGGATATGCATCATTATGAATTTTTATGAGGGATCGGTTGGTGACAAGATGGCTAGATTCAGAGAGGGGAGGATTTCGTTGCCTGATGTTCTGAGGTATGGTATCGATCTGGCTCAAGGTATCCTAGAACTTCACTCAAAGGGGATCCTAGTTCTCAACCTTAAACCGTCCAATGTGCTTCTTGATGATACTGATCAAGCAATACTGGGAGATTTTGGTATTCCAAATCTTCTGTTTGGTTCCTCATTACTAAGCTCAGATACTGCCAATAGGCTTGGTACTCCAAATTACATGGCTCCAGAACAATGGCAACCAGAAGTCAGAGGCCCTGTATCCTTCGAAACAGATTCATGGGGATTTGCGTGCACTATTGTGGAAATGTTGATTGGTAATCAACCTTGGTATGGGTGTCCTGTTGGTGAAGTATATCGATCGGTTGTTGAAAAGTATGAAAAACCTCAGATTCCTGGCGGCCTTCCTTCTTCAGTTGAAAATGTCCTCAGTGGCTGCTTTGAATATGATTTGAGGAATCGCCCTTCAATGGTAGATATTCTGTCCGTCTTTAGAAGCTCACGGAATGCAGTAGTCAATGATGGAGGATGGAGATATCTTGGAATCCACAAAACTATAGCAAAATCAAGTAGCACGGGCTACACACAGTGGTCCCTCTCAAAGGATCATCTTCGGGTGGGTGACACAGTGCGATCTAGAAAACCTTCCAATTCATGCAATCCACAGAACATGGAGGTCCCAGAAGGAAATGTTGTTGGTAATGCAGATCATGGATTTGTTTTAGTGAGGCTCCATGGAGTTCATGACCCTGTAAGGATTTATGCGTCAACTCTTGAACGTGTCACCAATGGTTTAGGAGCTGGGGATTGGGTGCGCATGAAGGAAGAAGATGATAAACACTCTCCAGTGGGTATTCTTCATTCTATCAGTCGTGATGGCAGAGTGAATGTTGGATTTATAGGCCTTGGAACTCTTTGGAAAGGAAACTCTTCGGAACTTGAAATGGCAGAGTCTTACTGTGTGGGGCAATTTATTAGGCTGAAACCCAATGTTCTAAGTCCCCGATTTGAATGGTTGCGTAGAAGGGGAGGTGCGTGGGCTACTGGTAAGATTTCTTGGATCCTACCGAATGGATGTCTGGTTGTCAAGTTCCCAGGCATGTTGAACTTCTGGGATGCACCAAGCACTTTCTTGGCTGATCCCTCTGAGGTTGATGTGGTTAATTTTAAGAATTGTGCAAAGATGATAGAGAAGTATCAACATGTAGAGGATCACCATTGGGCAGTTAGACCTGTTCTAATTGCATTTGGCCTCCTTAGTACTGTTAAACTAGGGATGTCAATTGGAAAGAAAATTGGCAGGAACATGAACGTGAATGCAGTGGAGAATGAAAGTCATTATACAGATAGCCAGAATGCTGGCAGCCCTACATCTACATGGACATCTTCAGTAGCTAACATCCTTTTCAGAGAAGGCGTTAACTTGCCAACTGGGCGGTAG 1869 0.4371 MSQDIATSPVPFDFELLVGDPENLRTVKTSASRTDPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLPPVREEHKKTALEKFFELYFQCQGVARVCWLLGISILNGRICIIMNFYEGSVGDKMARFREGRISLPDVLRYGIDLAQGILELHSKGILVLNLKPSNVLLDDTDQAILGDFGIPNLLFGSSLLSSDTANRLGTPNYMAPEQWQPEVRGPVSFETDSWGFACTIVEMLIGNQPWYGCPVGEVYRSVVEKYEKPQIPGGLPSSVENVLSGCFEYDLRNRPSMVDILSVFRSSRNAVVNDGGWRYLGIHKTIAKSSSTGYTQWSLSKDHLRVGDTVRSRKPSNSCNPQNMEVPEGNVVGNADHGFVLVRLHGVHDPVRIYASTLERVTNGLGAGDWVRMKEEDDKHSPVGILHSISRDGRVNVGFIGLGTLWKGNSSELEMAESYCVGQFIRLKPNVLSPRFEWLRRRGGAWATGKISWILPNGCLVVKFPGMLNFWDAPSTFLADPSEVDVVNFKNCAKMIEKYQHVEDHHWAVRPVLIAFGLLSTVKLGMSIGKKIGRNMNVNAVENESHYTDSQNAGSPTSTWTSSVANILFREGVNLPTGR* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01901 622 Gene3D Phosphorylase Kinase; domain 1 19 128 - -
Lapu9g01901 622 Gene3D Transferase(Phosphotransferase) domain 1 129 328 - -
Lapu9g01901 622 SUPERFAMILY Protein kinase-like (PK-like) 40 308 IPR011009 -
Lapu9g01901 622 Pfam Protein tyrosine and serine/threonine kinase 43 305 IPR001245 GO:0004672|GO:0006468
Lapu9g01901 622 CDD STKc_PknB_like 44 309 - -
Lapu9g01901 622 ProSiteProfiles Protein kinase domain profile. 43 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01901 622 PANTHER OS06G0639500 PROTEIN 8 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01901 Lapu-Chr9 33789051 33793300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01901 34 308 MAP Kinase Kinase Kinase AT2G17700 26.523 6.61e-22 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lapu9g01901 PK_Tyr_Ser-Thr 3.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01901 - - gmx:100780636 1127.46