Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01897 ATGGAACTTCAGTTAGGTCTTGCTTTCCCCATTCACAACTCCGTTCAGGAATTCAAGCTTAACAAGTCCAAACAGATAGTGAGTTTAGAGTTATGGAGACCTAATTGCGGTTCTGAAAGCGGAAAACATGTCAAACGCAAGCGTAGCTTTGAAGAGTCCTTTGAACGTTTTCGGAAACCTTTGCCTTTACTAGTATGGAATGGGCAGCCAAATGAAGAAGATGACCGTAGTCAAAAGGTGCAAAGAAACATCCACACACCAAACAAGAACAGTGAGGAAGAAAATCATTTGGTGGGGTGGCCACCAGTTAAATCATGGAGGAGAAAAGAACTTCATCAGCATCATCCTCCAAGAGACCAAATGATTCAAGCTAATGAGAATCAAAGTAGAGGATCAAACTCTTTATATGTCAAAGTTAACATGGAAGGGGTAGCCATAGGAAGGAAAATCAATATGAGACTTTTCAACTCGTATCAGACACTTACAAACACCTTAATCAACATGTTTTCTAAATACGAAAAATTGGAGGAAGCTGGGGAAAGTTACACACTCACCTTTCGAAATGAGCAAGGGGATTGGCTGCAAGTAGGACATGTTCCATGGCAGTAA 609 0.4089 MELQLGLAFPIHNSVQEFKLNKSKQIVSLELWRPNCGSESGKHVKRKRSFEESFERFRKPLPLLVWNGQPNEEDDRSQKVQRNIHTPNKNSEEENHLVGWPPVKSWRRKELHQHHPPRDQMIQANENQSRGSNSLYVKVNMEGVAIGRKINMRLFNSYQTLTNTLINMFSKYEKLEEAGESYTLTFRNEQGDWLQVGHVPWQ* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01897 202 Pfam AUX/IAA family 2 202 IPR033389 -
Lapu9g01897 202 Gene3D - 129 202 - -
Lapu9g01897 202 ProSiteProfiles PB1 domain profile. 134 202 IPR000270 GO:0005515
Lapu9g01897 202 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 201 IPR003311 GO:0005634|GO:0006355
Lapu9g01897 202 SUPERFAMILY CAD & PB1 domains 128 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01897 Lapu-Chr9 33766869 33768133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01897 137 201 B3 DNA Binding Superfamily AT3G61830 33.846 1.24e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Lapu9g01897 AUX_IAA 1.9e-29 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01897 K14484 - gmx:100802759 339.732