Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01892 ATGAGATTAGGTGTGAGTAAGCACGTTGTGCGGTGCTCAATCGGCACCGTTTCAGGCCAGTCCAAAAACCATTTTCCCGCCAAATCACAATGTTCATCTTTCTCAACTGTCAAGTTCCGCCCCGACAATGGTTCTTCAGATTTAGCGGTTTCTAGTAGCAGCAGGAGAGAGCTGATATGCATAGTCACGTGGCCATGTCTTCTTCCTCTCATAGGTTGTCTCCCAGCCAACGCCTTGCAGGCAGGTGCAAAGGAATATCTTCTCATTAAAGAAGAGGTGAGGAAGGTGTTGTCTAAGGGAAAGGCAGCTGGCGTGCTTCGATTGGTTTTCCACGATGCTGGAACCTTTGACATCGATGACAATACAGGTGGTATGAATGGTTCTATACTCTATGAACTTGAAAGACCCGAAAATGCTGGCCTGAAAAAATCAGTAAAGGCATGCTCTGTCTGTCTCAGTTTTGCAAAAAGCAAAGACTCAGATAGATGCTATCCAACCAGGTCCTTCTTCTATCTGGTAACTGCTGCTAATATATCTTGGGCGGACATGATTGCTGTGGCTGGAGCTGAAGCTGTTGAACTATGCGGAGGTCCACCTATCCAAGTTTCACTGGGCAGACTAGATACATTGGTGCCTGATCCAGAAGGGAGACTCCCTGAGGAATCTCTTAATGCTTCTGGTTTGAAGATATGTTTCCAGAGCAAAGGCTTATCAACACAAGAACTTGTTGCATTGTCTGGAGCCCACACTATCGGAAGCAAAGGTTTTGGAAGCCCAAATTCTTTTGATAATTCATATTATAAGGTCCTTTTGGAGAAGCCATGGACGTCTTCAGGTGGTATGTCGAGTATGATTGGCCTTCCTTCAGATCACGCCCTTGTCGAGGATGATGAATGCTTAAGATGGATTAAAAAATACGCAGACAATGAGAATCTGTTCTTTGAAGATTTCAAAAATGCGTACGTCAAGCTGGTGAATTCTGGTGTCCGGTGGAAAAACTTATTTGCTATGAAGCATGTGCATGCAGGGCCAATAAATTTCATGCCAGAATCGTTTAAATCTGAAATGTGA 1071 0.4444 MRLGVSKHVVRCSIGTVSGQSKNHFPAKSQCSSFSTVKFRPDNGSSDLAVSSSSRRELICIVTWPCLLPLIGCLPANALQAGAKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFDIDDNTGGMNGSILYELERPENAGLKKSVKACSVCLSFAKSKDSDRCYPTRSFFYLVTAANISWADMIAVAGAEAVELCGGPPIQVSLGRLDTLVPDPEGRLPEESLNASGLKICFQSKGLSTQELVALSGAHTIGSKGFGSPNSFDNSYYKVLLEKPWTSSGGMSSMIGLPSDHALVEDDECLRWIKKYADNENLFFEDFKNAYVKLVNSGVRWKNLFAMKHVHAGPINFMPESFKSEM* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01892 356 Pfam Peroxidase 91 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu9g01892 356 Gene3D - 90 328 - -
Lapu9g01892 356 PRINTS Haem peroxidase superfamily signature 102 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu9g01892 356 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu9g01892 356 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu9g01892 356 Gene3D Peroxidase, domain 2 219 321 - -
Lapu9g01892 356 ProSitePatterns Peroxidases active site signature. 102 113 IPR019794 GO:0004601
Lapu9g01892 356 FunFam Adenylate/guanylate cyclase 219 321 - -
Lapu9g01892 356 ProSitePatterns Peroxidases proximal heme-ligand signature. 241 251 IPR019793 -
Lapu9g01892 356 FunFam L-ascorbate peroxidase 92 227 - -
Lapu9g01892 356 ProSiteProfiles Plant heme peroxidase family profile. 102 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu9g01892 356 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 84 334 IPR044831 GO:0004601|GO:0034599
Lapu9g01892 356 PRINTS Plant peroxidase signature 177 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu9g01892 356 PRINTS Plant peroxidase signature 104 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu9g01892 356 PRINTS Plant peroxidase signature 196 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu9g01892 356 PRINTS Plant peroxidase signature 240 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu9g01892 356 SUPERFAMILY Heme-dependent peroxidases 88 341 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01892 Lapu-Chr9 33721466 33726750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01892 87 330 Peroxidase AT4G31760 26.829 3.40e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01892 K00434 - gmx:100792735 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01892 9 33721466 33726750 Lapu9g01892 9 33721466 33726750 ECH