Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01879 ATGAGTGCGGCTTTTCAGTGTTTATCGTGTGCTGGGACTGAACCTTTCCTCACACCAGCCCAATCCCTCACTCTTTCTTTCCAACCCAAACCATTTTTCTGCTCTCTTCCTCTTTCCTCTCGCGCTCGTAACCTCTCTTCTTCAATCGTCGCCGCTTCTTCCAAGAAGAAAAAGAACAAGAAAAAACTGCCTCGTCAACATGTTACTGAAGGCGGCGAGGAGGATTTCGACGCGTTTGAGCTTCTCTTCAAGCAACTCGAAGAAGATCTCAAACGCGGTGATTTGTCAGGTGATGACGGCGAAGACGGGATAACTGAGGAAGAGATGACATTGCTTGAACGTGAGTTGGAAAATGCCTTGGGGGACTTTGACGATGAATTGTTGAACTCGGATGTAATCGACGTAGAAATTGGTGGTGATTCAGACAATGATGATGAGGATGACGATGAGGATGATGGTGATGAAGATGGTGATAGTGAGGGTGAGGATGAGGATGGAGATGAAAAGCCACTGAACCTTAAGAATTGGCAGATGAAGAAATTGGCCAGAGCTTTGAAAGCCGGCCGCCGCAAAACGAGTATAAAAAATCTTGCTGCCGATCTTTGTCTGGATAGGGCTCTTGTTCTTCAATTACTTCGTGATCCTCCTCCAAATCTCTTAATGATGAGTCTAACTATACCTGATGAACCCACAACAAAAGTAGTATCACTTGAAACTAAGCCTAGAGAGATTCTCCTTCAAGAAACAAGTATTGATCGAGCTGAATCTGAACCCAAGAATAAAGTACCTGTTCATACCTTGCAACGTAATTGGAATGCTCAAAAGCGATTGAAGAAGGCCCATGTTGACACTCTGGAGAGAGTTTATAGGAGATCAAAACGACCTACTAATGCAATGATCAGCAGCATTGTACACGTAACAAACATTCCTCGAAAAAGAGTTGTTAAGTGGTTTGAAGACAAACGTGCTGAGGAGGGAGTTCCAGATCATCGTCTTCCTTACCAGCGCTCTGTTCCTGAAACGGCTTGA 1029 0.4451 MSAAFQCLSCAGTEPFLTPAQSLTLSFQPKPFFCSLPLSSRARNLSSSIVAASSKKKKNKKKLPRQHVTEGGEEDFDAFELLFKQLEEDLKRGDLSGDDGEDGITEEEMTLLERELENALGDFDDELLNSDVIDVEIGGDSDNDDEDDDEDDGDEDGDSEGEDEDGDEKPLNLKNWQMKKLARALKAGRRKTSIKNLAADLCLDRALVLQLLRDPPPNLLMMSLTIPDEPTTKVVSLETKPREILLQETSIDRAESEPKNKVPVHTLQRNWNAQKRLKKAHVDTLERVYRRSKRPTNAMISSIVHVTNIPRKRVVKWFEDKRAEEGVPDHRLPYQRSVPETA* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01879 342 CDD homeodomain 274 323 IPR001356 GO:0003677
Lapu9g01879 342 MobiDBLite consensus disorder prediction 135 174 - -
Lapu9g01879 342 SUPERFAMILY Homeodomain-like 270 331 IPR009057 -
Lapu9g01879 342 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 13 335 - -
Lapu9g01879 342 Pfam Homeodomain 276 324 IPR001356 GO:0003677
Lapu9g01879 342 ProSiteProfiles 'Homeobox' domain profile. 268 328 IPR001356 GO:0003677
Lapu9g01879 342 SMART HOX_1 274 332 IPR001356 GO:0003677
Lapu9g01879 342 MobiDBLite consensus disorder prediction 135 166 - -
Lapu9g01879 342 Gene3D - 270 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01879 Lapu-Chr9 33586803 33589770 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lapu9g01879 Homeodomain 6.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01879 - - gmx:100798718 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01879 9 33586803 33589770 Lapu9g01879 9 33586803 33589770 ECH