Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01872 ATGCCATTAATGAATGTGTGTCACTGGTTCAATCAAACTCAATTGAACTTTCAAGAGAAAGCTCTTCAAATGCTAGCTTCCATCACCAAGGTCAATTCCCAAAACAGAACCTCACTAGCTCAAACAGAAGGAGCCATTCCTGCAATAGCCACACTAACAAACTCTGTCTCCCCCATCATCCAAACGCTTTCCTTGTTAACCCTCTTCAACCTATCTCTCAATCCTGATCGAAAACAATCTCTTGCTGACATGGAAACCATTTACTACCTCAACTCCCTCATCACCAGCTCATCATTTTCCCTTGACTCCTCCAAATTGGCCTCCTCATTGATCTGCAGCTTGGCCATGCATGACAAAAACAAGGCCAAATTTGGGGTGGCATGCACAGTTCAATTGCTAGTGAAAGCATTTGAAGGGTCTCATGGTTCTGATGCACACCACCTTCTGAGTTCTCTGGCTGAGCTTGTTCATTTTATGGAAACTGCACTTTGGCAGTGCGAACCGGGCAATGCCAGTGCTACTTAA 525 0.4457 MPLMNVCHWFNQTQLNFQEKALQMLASITKVNSQNRTSLAQTEGAIPAIATLTNSVSPIIQTLSLLTLFNLSLNPDRKQSLADMETIYYLNSLITSSSFSLDSSKLASSLICSLAMHDKNKAKFGVACTVQLLVKAFEGSHGSDAHHLLSSLAELVHFMETALWQCEPGNASAT* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01872 174 PANTHER U BOX DOMAIN-CONTAINING 18 152 - -
Lapu9g01872 174 Gene3D - 2 166 IPR011989 -
Lapu9g01872 174 SUPERFAMILY ARM repeat 13 163 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01872 Lapu-Chr9 33532041 33532975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01872 18 147 U-box Gene Family AT5G65200 28.358 4.54e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01872 - - vra:106761892 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01872 9 33532041 33532975 Lapu9g01872 9 33532041 33532975 ECH