Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01866 ATGTACTGGTCCATAGTGACTCTTTCAACAGTTGGTTATGGTGACCTCCATCCTGTAAATACCAAGGAGATGGTGTTTGACATATTTTATATGCTCTTTAACCTGGGACTAACGGCATATCTAATCGGAAACATGACAAATTTAATTGTTCACTGGACAAGCAGAACTAGAAAATATAGAGACGAGGTGCAAGCTGCCACAGATTTTGCCCATCGGAATGGGTTACCTATCCGCTTGCAAGAACAGATGTTTTCTCATTTGTTTATGAAATACAGAACAGATTTAGAAGGACTGCAGCAACAAGAAATTATCGAATCACTTCCAAAGGCTATTCGATCTGGCATCTCACACTTCCTATTCTCCTCACTTCTTGAGAAAGTGTACTTGTTTCGTGGAGTGTCAACTGACCTACTGTTTCAACTGGTCTCGGAGATGAGGGCTGAGTATTTTCCTCCAAAGGAAGAAGTAATTTTGCGGAATGAAGCGCCCACAGACTTTTATATATTTGTTACTGGTGCTGCAGAACTCATCATTAAAAGGAATGGATTCGAAAAGGTCGTTGGTGAGGCAGTGGCTGGAGATATAGTTGGAGAAATTGGAGTTCTATGTTATAGGCCACAGATGTTTACAGTTCGAACAAAAAGATTGAGCCAAATTCTACGCTTGAACCGAACTACATTTCTAAATCTAGTTAATTCAAATGTTGGAGATGGGGGAATAGTCATGAACAATTTTCTCCAGAGTTTGCAAGAATCAAGTTATCCAGAGATGGATGTTATTTTAGAAGAAACGGAGGCCATGATCGCTCAGGGTAAAATGGATATGCCCATTACCCCGTGCTTTGCAGCAAGCAGAAATGATGATGTATTGTTAGAGCGTTTGCTAAAGAAGGGTTCAGATCCAAATGAAGGAGATAGGAATGGAAAGACTGCACTGCATATCGCAGCTCACAAAGGCAATGAGCATTGCGTAAGTTTGCTTATAGAATATGGTGCTGATCCAAATAGCAAAGACATGAACGGAATTGTCCCACTAATGGAAGCAAGGAAGGGTGATCATAAATCTGTGATAAAACTTCTCATAGAAAAGGGGGCAATTTTGACTTCTGCCTATGAAGGCAGTCTAGCATGCAGGGCTGTTGAGCGAAATAACAAAGAATTGCTCGAGGAAATTCTTGAATGCGGTGTGGCTGTGTCACAACCCAACAAAAATGGTGTCACTGCTCTCCATATTGCAGTAGTTGAATCAAACACTGAGATGATTAACTTCCTTGTAGACCAAGGAGCACTCATAGATATACCAGATGCTAATGGGTGGACTCCCAGGGGTTTGGCAGAAGAGGACGGCAAGGAAGAGATTCAAGCTATATTCCGTGACACGGGAGAGAGCATAAAATCAGATGTTATTCCAATAACAAAGAATAACAGTATTCGAAGGTTTCAAAGAGATCCCAGCATGTCTGCCACTTCCCAGGAAAGCACACCATCTACTAGAGAGTTTACTTGGCAAGATAGTAAGGGGAGAAGGTCTTCCAGCTCTTTTCATAATTCCCTTTTTGGAATTCTCTCTACTGCCAATCGTGCGAGAAGTGCAAGGGAATCTGAAAACAGTAAAACCAACACAAGAAATGAGAGAAAGTTACCCAGAGTGATAATTAGTTGTCCTGAAAAAGGTGAACATGCTGGAAAACTTGTTTTGTTGCCGAAGTCCCTTAAAGAGCTGCTAGATATTGGTGCCAGTAAGTTTGATATATCTCCCACCAAAATTTTGACCACAGCTGGAGCTGAAGTAGACAATATAAATCTTATAAGAGATGGTGATCATCTTGTTATTGCCCGGGATGATTCCTAA 1851 0.4111 MYWSIVTLSTVGYGDLHPVNTKEMVFDIFYMLFNLGLTAYLIGNMTNLIVHWTSRTRKYRDEVQAATDFAHRNGLPIRLQEQMFSHLFMKYRTDLEGLQQQEIIESLPKAIRSGISHFLFSSLLEKVYLFRGVSTDLLFQLVSEMRAEYFPPKEEVILRNEAPTDFYIFVTGAAELIIKRNGFEKVVGEAVAGDIVGEIGVLCYRPQMFTVRTKRLSQILRLNRTTFLNLVNSNVGDGGIVMNNFLQSLQESSYPEMDVILEETEAMIAQGKMDMPITPCFAASRNDDVLLERLLKKGSDPNEGDRNGKTALHIAAHKGNEHCVSLLIEYGADPNSKDMNGIVPLMEARKGDHKSVIKLLIEKGAILTSAYEGSLACRAVERNNKELLEEILECGVAVSQPNKNGVTALHIAVVESNTEMINFLVDQGALIDIPDANGWTPRGLAEEDGKEEIQAIFRDTGESIKSDVIPITKNNSIRRFQRDPSMSATSQESTPSTREFTWQDSKGRRSSSSFHNSLFGILSTANRARSARESENSKTNTRNERKLPRVIISCPEKGEHAGKLVLLPKSLKELLDIGASKFDISPTKILTTAGAEVDNINLIRDGDHLVIARDDS* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01866 616 Gene3D Jelly Rolls 95 253 IPR014710 -
Lapu9g01866 616 ProSiteProfiles KHA domain profile. 549 616 IPR021789 -
Lapu9g01866 616 PANTHER POTASSIUM CHANNEL AKT1 1 612 IPR045319 GO:0005249|GO:0006813
Lapu9g01866 616 MobiDBLite consensus disorder prediction 475 513 - -
Lapu9g01866 616 Pfam Ankyrin repeats (3 copies) 281 365 IPR002110 GO:0005515
Lapu9g01866 616 Pfam Ankyrin repeats (3 copies) 379 441 IPR002110 GO:0005515
Lapu9g01866 616 SUPERFAMILY cAMP-binding domain-like 54 248 IPR018490 -
Lapu9g01866 616 FunFam Potassium channel KAT2 118 253 - -
Lapu9g01866 616 Gene3D - 1 51 - -
Lapu9g01866 616 SUPERFAMILY Voltage-gated potassium channels 1 50 - -
Lapu9g01866 616 Pfam Cyclic nucleotide-binding domain 149 234 IPR000595 -
Lapu9g01866 616 ProSiteProfiles Ankyrin repeat region circular profile. 340 365 - -
Lapu9g01866 616 ProSiteProfiles Ankyrin repeat profile. 340 372 IPR002110 GO:0005515
Lapu9g01866 616 ProSiteProfiles Ankyrin repeat region circular profile. 404 435 - -
Lapu9g01866 616 ProSiteProfiles Ankyrin repeat profile. 404 436 IPR002110 GO:0005515
Lapu9g01866 616 Pfam Ion channel 1 49 IPR013099 -
Lapu9g01866 616 ProSiteProfiles Ankyrin repeat region circular profile. 307 338 - -
Lapu9g01866 616 PRINTS Ankyrin repeat signature 356 370 IPR002110 GO:0005515
Lapu9g01866 616 PRINTS Ankyrin repeat signature 308 323 IPR002110 GO:0005515
Lapu9g01866 616 SMART cnmp_10 129 246 IPR000595 -
Lapu9g01866 616 CDD CAP_ED 129 234 IPR000595 -
Lapu9g01866 616 MobiDBLite consensus disorder prediction 525 544 - -
Lapu9g01866 616 SUPERFAMILY Ankyrin repeat 280 461 IPR036770 -
Lapu9g01866 616 Gene3D - 277 459 IPR036770 -
Lapu9g01866 616 ProSiteProfiles cAMP/cGMP binding motif profile. 129 248 IPR000595 -
Lapu9g01866 616 SMART ANK_2a 340 369 IPR002110 GO:0005515
Lapu9g01866 616 SMART ANK_2a 404 433 IPR002110 GO:0005515
Lapu9g01866 616 SMART ANK_2a 307 336 IPR002110 GO:0005515
Lapu9g01866 616 SMART ANK_2a 275 303 IPR002110 GO:0005515
Lapu9g01866 616 SMART ANK_2a 371 400 IPR002110 GO:0005515
Lapu9g01866 616 Pfam KHA, dimerisation domain of potassium ion channel 548 611 IPR021789 -
Lapu9g01866 616 ProSiteProfiles Ankyrin repeat profile. 307 339 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01866 Lapu-Chr9 33496696 33500648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01866 1 614 Ion Channels AT2G26650 57.624 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01866 K21867 - gmx:100786870 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01866 9 33496696 33500648 Lapu9g01866 9 33496696 33500648 ECH
Lapu8g00593 8 23482459 23490363 Lapu9g01866 9 33496696 33500648 PCT