Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01847 ATGGCTGTGCTGCTGAGAATGGCTCAGCCTCACAATGGCAACGCCAACAACACTGTCAACCACAATTTGGTCCTTCATGACTTTCTGGGTATGAAGCCCGCTGCTGATTCTCCCAAAACCACCGATGTAAGGTTGTCGGAACCGTCGGCTTCTGCCTCCTCTGCCGGTGCACGTGGTCCTTTCTCTGCCACCTCCGACATCGCTTCTGAGAAACAGGTAGGAAACCATCTTGAGGGAGTTCCTTTTTATGGCCCGAGGAGTGATCTTTCTGGTACTGAGATCAGTAACAGATTAGTTGGAAGCAAGAGAAGTAATTCTGATTCCGCTTTTACGGGTTCCTCCAGAGAGGCCTTCCAAATGGTCCCTGAGTCCTTTCAAAACTCACATTTGATGAAGATCCTCCGGAATGCAGCTGGAGGAGATAGGTCTAGAAGGCCTAATGATGATGAAGTGTTACTTGGTATGCAGTCAATGAAACAATCTTCTTCTCAGATATTTCAGCCTCCCACTGGCACTAAGATCGATGCCAATAAGTGGGAACGATCTATTCTCATGAATGTTGGCCCTTCCATGCAGCATCCACCCCGTGGAGGGCAATTGGCACCTTTTGTCCACCAAATGGCCTCAAGCAAGATTAGGGATACCAATGCTGGCCCTTCATTCATTTCCCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATCAAGGGTCCTGGAATTTTAAGTTCTATAAATGCAGCTGCTGGGAGCACTGAGAAAACTCCATCTGCTGTGATGCTTGGTGGCAGCAGGCCAAAGCCTGGAACTAATATAATAGAATCATCCACACCTCCAAGCAGTCAACACGCCCTAACTTCTGCCAGCCGTCAGATGACTATTTTTTATGGAGGCCAAGCTCATGTTTTTGATGATGTCCATCCTCATAAGGCAGATGTTATAATGGCTTTGGCGGGGTCAAATGGTGGATCTTGGTCGACTGCGTTCTCTCCTAAATCTGCTGTAAAAATGGTCAATGATGGTAATTTGCACAGCGGAGAAAATGAAACAGGTGCAGTGAATAATGTGGCATTCCCACAGGAGCTTCATGGGAAATTGTCTATTACTGGAAGTTCTAGCCACGCCATGGGGCCTGGGGATCGAGTGACTACTCCTGCAGGGGCACACCAAGGTAGCATTTTCGCTAAAGATACCAGAAATCAAGTCCAACCATCAGATCCCAGTTCTGAAGACAGAAGAGGACAGTGA 1245 0.4771 MAVLLRMAQPHNGNANNTVNHNLVLHDFLGMKPAADSPKTTDVRLSEPSASASSAGARGPFSATSDIASEKQVGNHLEGVPFYGPRSDLSGTEISNRLVGSKRSNSDSAFTGSSREAFQMVPESFQNSHLMKILRNAAGGDRSRRPNDDEVLLGMQSMKQSSSQIFQPPTGTKIDANKWERSILMNVGPSMQHPPRGGQLAPFVHQMASSKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSINAAAGSTEKTPSAVMLGGSRPKPGTNIIESSTPPSSQHALTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSAVKMVNDGNLHSGENETGAVNNVAFPQELHGKLSITGSSSHAMGPGDRVTTPAGAHQGSIFAKDTRNQVQPSDPSSEDRRGQ* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01847 414 MobiDBLite consensus disorder prediction 393 408 - -
Lapu9g01847 414 ProSiteProfiles Tify domain profile. 284 319 IPR010399 -
Lapu9g01847 414 Pfam tify domain 286 318 IPR010399 -
Lapu9g01847 414 SMART tify_2 284 319 IPR010399 -
Lapu9g01847 414 MobiDBLite consensus disorder prediction 36 62 - -
Lapu9g01847 414 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 90 358 IPR040390 -
Lapu9g01847 414 MobiDBLite consensus disorder prediction 366 414 - -
Lapu9g01847 414 MobiDBLite consensus disorder prediction 42 62 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01847 18 317 Tify Gene Family AT4G32570 41.139 6.42e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lapu9g01847 tify 2.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01847 - - gmx:100819293 719.153