Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01845 ATGGATAAAGTAAATAAAGTTTGTGCCAAAGATGAAGAACGTCCAATCCGGATCACCAGAGCAAAGGCTAAAGCCTTGAGAGGAATTCCTCCCCCCTCAAGACCTTCCTCTAAAAGTGAACTGAAAAACGTGTGTCGAGCAAATTCCAAAAGAGCGGCGACTTCTGAAGACCAAACTTCTGTGGTTGTTCCTGCTCTTGTTCAAAATAAGAGAAGGGCAGTTCTTGTAGATGTAACAAACATTTGCGGAAAATCACATGATAAGTGTAATGAGGCATCGAAATTTAGGGCCAAACGAGTTTATACAAAGAAAAGCTCAAAACTAGCTTCAGGTGTTTCCACTGAAGTCTCATCAACACAACGGAATGTTAGAGCAAAGTTAGCTGAAGATTTATCGACAATAAGGATGGTAGAATCTAATGACACCATAAGTGAACGTGTTACACTCGGAACCAAGCCGTCAATGCAAGATTCTGTGAAATCTGATGAACTCCTGAGCTCTGCAAAAAATGATATAAATGTGATTCGTGAGAAGCCAGGAACCGCAAACTCCCTTGATATAGTGGACGTTGATTTAGAGTTAAAGGATCCTCAAATTTGGAGTTCTTATGCCTCTGACATATACAATAACAATCGAGTTACAGAGCTTAAAAGAAAACCATTGACCAACTACATGGACAAGTTGCAGACAGATATTAATCCAAGCATGCGTGGAATTCTGGTAGATTGGCTTGTGGAGGTTTCTGAGGAATACAGATTGGTTCCAGACGCTCTTTACCTGACAGTGAACCTGATTGATCGGTATCTCTCAACTAAATTCATTCAGAAGCAAAGGCTACAGTTGCTGGGTGTTACTAGCATGCTGATTGCATCAAAGTACGAAGAGATGTGCCCACCTGGAGTGGAAGAATTTTGCTTCATCACAGATAACACATACACAAAAGAAGAGGTACTGAAAATGGAGAGAGAAGTACTGAATGTGATGCATTTTCAGTTATCTGTTCCCACAATCAAAACATTTCTGAGGAGATTCATCCAAGCAGCACAGTCTTCTTACAAGGCTCCTTGTGTTGAACTGGAATTCTTGGCAAATTATTTAGCAGAGCTTTCTCTTGTTGAATATAGCTTCTTCCAGTTTCTTCCTTCCCTTGTTGCTGCATCTGCTGTGTTCCTTGCCCGATGGACCCTGAACGATTCAGAACATCCATGGAATCCAACTTTGGAGCACTATACAAACTACAAAGCTTCAGAGCTCAAAACTGTTGTTCTTGCACTGCAAGATCTGCAACTTAATTCCAAAGGCTGTCCCCTCAATGCTGTCCGCGATAAGTATAAATTACAGAAGTTCAATTGTGTGGCAAACTTGTCTCCAAAACCGGTGCAGTCACTCTTCCAAGCCCAAGTGTAA 1407 0.4129 MDKVNKVCAKDEERPIRITRAKAKALRGIPPPSRPSSKSELKNVCRANSKRAATSEDQTSVVVPALVQNKRRAVLVDVTNICGKSHDKCNEASKFRAKRVYTKKSSKLASGVSTEVSSTQRNVRAKLAEDLSTIRMVESNDTISERVTLGTKPSMQDSVKSDELLSSAKNDINVIREKPGTANSLDIVDVDLELKDPQIWSSYASDIYNNNRVTELKRKPLTNYMDKLQTDINPSMRGILVDWLVEVSEEYRLVPDALYLTVNLIDRYLSTKFIQKQRLQLLGVTSMLIASKYEEMCPPGVEEFCFITDNTYTKEEVLKMEREVLNVMHFQLSVPTIKTFLRRFIQAAQSSYKAPCVELEFLANYLAELSLVEYSFFQFLPSLVAASAVFLARWTLNDSEHPWNPTLEHYTNYKASELKTVVLALQDLQLNSKGCPLNAVRDKYKLQKFNCVANLSPKPVQSLFQAQV* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01845 468 ProSitePatterns Cyclins signature. 237 268 IPR006671 -
Lapu9g01845 468 Gene3D - 220 333 - -
Lapu9g01845 468 CDD CYCLIN_AtCycA_like_rpt1 196 331 - -
Lapu9g01845 468 SUPERFAMILY Cyclin-like 334 457 IPR036915 -
Lapu9g01845 468 SMART Cyclin_C_2 335 458 IPR004367 -
Lapu9g01845 468 MobiDBLite consensus disorder prediction 24 56 - -
Lapu9g01845 468 SMART cyclin_7 339 427 IPR013763 -
Lapu9g01845 468 SMART cyclin_7 242 326 IPR013763 -
Lapu9g01845 468 Pfam Cyclin, N-terminal domain 206 333 IPR006671 -
Lapu9g01845 468 MobiDBLite consensus disorder prediction 36 56 - -
Lapu9g01845 468 Gene3D - 206 454 - -
Lapu9g01845 468 FunFam Mitotic cyclin 6 220 320 - -
Lapu9g01845 468 Pfam Cyclin, C-terminal domain 335 457 IPR004367 -
Lapu9g01845 468 PANTHER CYCLINS 155 446 IPR039361 -
Lapu9g01845 468 SUPERFAMILY Cyclin-like 195 332 IPR036915 -
Lapu9g01845 468 PIRSF Cyclin_A_B_D_E 19 467 IPR046965 GO:0016538|GO:0044772
Lapu9g01845 468 CDD CYCLIN_AtCycA-like_rpt2 335 449 - -
Lapu9g01845 468 FunFam Cyclin A1 322 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01845 Lapu-Chr9 33311447 33317731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01845 16 464 Core Cell Cycle Gene Families AT5G25380 51.333 9.59e-149 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01845 K06627 - gmx:100807750 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01845 9 33311447 33317731 Lapu9g01845 9 33311447 33317731 ECH