Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01842 ATGGGTGTCGATTACTACGATGTATTGAAGGTTAACAGAAATGCTACGGAGGATGATTTGAAGAAATCGTATAGAAAGTTGGCCATGAAATGGCACCCTGATAAGAACCCCACCAACAAAAAAGAAGCTGAAGCCAATTTCAAACAGATCTCTGAGGCTTACGAGGTGCTGAGTGACCCTCAGAAAAGGGTGGTTTACGATCAGTATGGAGAGGAGGGATTGAAAGATAGGCCACCTGATGAACCATCAAATGGGTTCAACCCCAGAAATGCAGAGGATATTTTTGCAGAATTCTTTGGAAGTAGCCCTTTTGGATTTGGATCATCTAAGGCAGGGGCTTCTAGGAGATTCCCCTCTGATGGAGGGACAACAACATTTGGTGGATTTAGTGCAAATGATAATTTTCGATCATATAGTACTGGACGGGGGAATGTGCTAAAGAAGCCACTACCTGTGGAATCCAAACTGCCTTGCTCTTTGGAGGAATTGTACTCTGGATCTACAAGGAAAATGAAGATCTCAAGGAAGACAGTGGATGCTAACGGATGGACAGTTCCGGAAACAGAGATATTAACCATTGATGTGAAGCCGGGTTGGAAGAAAGGGACAAAGATTACGTTCCCAGAGAAAGGGAATCAACAACCAAATCAACTGGCAGCAGACCTTGTGTTTGTGATTGACGAGAAGCCTCATGATGTGTTCAAGAGAGACGGGAATGACCTTATTGTGAACAAAAGGGTATCATTAGCTGAGGCCATTGGAGGAACCACAATAAACCTCACCACACTTGATGGTCGTAGTTTAAGTGTTCCAGTGAGTGACATTGTGAGTCCTGGTTACGAGATGAATGTTGCGAAGGAAGGTATGCCAATAACAAAGGAGCCTGGTCATAGGGGTGATTTGAAGATCAAATTTGACGTCAGTTTTCCAACAAAGTTGACCCCAGAGCAACGAGCAGGACTCAAGCGAGCACTCACAAGTTGA 984 0.4421 MGVDYYDVLKVNRNATEDDLKKSYRKLAMKWHPDKNPTNKKEAEANFKQISEAYEVLSDPQKRVVYDQYGEEGLKDRPPDEPSNGFNPRNAEDIFAEFFGSSPFGFGSSKAGASRRFPSDGGTTTFGGFSANDNFRSYSTGRGNVLKKPLPVESKLPCSLEELYSGSTRKMKISRKTVDANGWTVPETEILTIDVKPGWKKGTKITFPEKGNQQPNQLAADLVFVIDEKPHDVFKRDGNDLIVNKRVSLAEAIGGTTINLTTLDGRSLSVPVSDIVSPGYEMNVAKEGMPITKEPGHRGDLKIKFDVSFPTKLTPEQRAGLKRALTS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01842 327 Pfam DnaJ C terminal domain 152 310 IPR002939 -
Lapu9g01842 327 CDD DnaJ 4 59 IPR001623 -
Lapu9g01842 327 CDD DnaJ_C 152 313 - -
Lapu9g01842 327 Gene3D DnaJ domain 3 111 IPR036869 -
Lapu9g01842 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 233 319 IPR008971 GO:0006457|GO:0051082
Lapu9g01842 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 152 232 IPR008971 GO:0006457|GO:0051082
Lapu9g01842 327 Pfam DnaJ domain 4 67 IPR001623 -
Lapu9g01842 327 Gene3D - 151 229 - -
Lapu9g01842 327 Gene3D - 230 327 - -
Lapu9g01842 327 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lapu9g01842 327 SMART dnaj_3 3 62 IPR001623 -
Lapu9g01842 327 SUPERFAMILY Chaperone J-domain 3 107 IPR036869 -
Lapu9g01842 327 FunFam DNAJ heat shock family protein 230 325 - -
Lapu9g01842 327 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 325 - -
Lapu9g01842 327 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lapu9g01842 327 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lapu9g01842 327 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lapu9g01842 327 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lapu9g01842 327 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lapu9g01842 327 FunFam Dnaj homolog subfamily b member 148 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01842 Lapu-Chr9 33291893 33293788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01842 5 69 C2H2 Transcription Factor Family AT1G74250 40.580 7.55e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01842 K09510 - gmx:100796426 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01842 9 33291893 33293788 Lapu9g01842 9 33291893 33293788 ECH