Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01825 ATGGAGGATCAAGCGAATCAAGCGCCACCGCCACACGATGAAGAGGAGGATTCCAAAAAGGAAGAAGATGAATTGATTGTGAAGGTTAACAAACTCATGGAAAAGATCACTTCTGCACCTGATAACCCTAAGGCCACCGTTCTCCATGCCCTTGCCTCTATTCTGGAAACGCAAGAGTCACGATACATGGAAGAGAACGGTCATTCTTTATCCAGTACTGCCCGTGCAGCGCATGTCATTGGTCGTCTTGGCGGCTTAATTCGGGAAAATGATGAGTTTTTTGAGTTGATATCTTCAAAGTTTCTGTCTGAAACAAGGTACTCAACTTCCATTCAAGCTGCTGCTGGAAGACTTCTCCTATGCTGTTCCCTAACATGGATATATCCTCATGTTTTTGAAGAACCCGTCATGGAAAATATAAAAAATTGGGTGATGGATGATAACACTGGGCTGCTTTCTGAAGAGCAGAATCTGAAGCATAGTTCAGGGAGAAGGGAGGCATCAGACTCTGAAATGTTGAAAACCTATTCTACTGGACTCCTTGCCGTGTGTTTGGTTGGTGGAGGTCAAATTGTGGAAGATGTATTGACATCAGGCTTGTCAGCTAAGCTTATGCGATATCTTCGATTACGTGTTTTGGGAGAGGCTAGTAGCAACCAGAAAGATGTTACTCATATAACAGAGACTAGGCATGCATCTGCGAATACTTCAGGGAGAGGTAGAGATGATGGTCGTGGTAGATTTCGCCAGCTCCTTGAACCAAATCATTTGGATGATACTAGGATGATTGATGAGAGATCTTTAGATGATGTAACTCTTGAAAGGGGTCCAGATAGAAGCATTAGTGGACAAACAATTCAAGAAGGATCTTGGATAGAAGGTGAACCACCTGATGGGCTTGGTGAAGGTGTTGATGTCCAGGAGGTAGATTCTGATGGGGAGGATAGATGGCGCTGTAGAGATATACGTGACGGAAGAATAAAATACAGTGAACACGAAGACAATGTTAGAGATGACTCTTCAAGGCGACGTTCAAACCGTGGATGGGGAAGATCTAAAGGGAAAGGAAGGGTCAATGAAGGGACTGTAGAAAGTGATCCCATTTTATCATCTCCTGGTTCTGGTAGTCGATTAGTACAGGGTCGGAGTGTTAGAGATAGAAGTTTAGTGAGGAATGCTGATGTTAGGAGGGTACCTGAGTCTAAGAAGACCCTTGGCAGGACCTCATTGGAGGCTTCTGGTTTTGAAAGAGAGGATCATGATGATTGTTTCCATGAATGCCGAATTGGAAATAAAGATATAACTGATCTTGTCCGGAAAGCAGTTCAAGCTGCTGAAGCTGAAGCTAGATCTGCTAATGCACCTGAAGAGGCTGTCAAAGCAGCCGGTGATGCTGCTGCCGACCTGGTTAAAACTGCAGCTTCAGAGGAATATAAATCCACTAATGATGAAGAAGCAGCTTTTTTGGCTGCTTCTAAAGCTGCATCAACTGTTATTGATGCTGCATCTGCAGTTGAAGTTTCAAGGAGTTCTATTGGCAACATTAGTGTAACAGAGAATGAGAGTGGCAAAGAAACAGAAACTAATGAGGATGTGGAAGAGTACTTCATCCCAGATACTCAATCACTTGCGCAGTTGAGGGAAAAATATTGCATTCAGTGTCTTGAGTTACTTGGGGAATATGTAGAAGTTCTTGGCCCTGTGTTGCACGAGAAGGGGGTTGACGTGTGTCTTGCACTTCTTCAGCAGAATTCTAAACATCGGGAGGCATCCAAGGTTGCTTTACTGTTGCCTGATGTCATGAAGCTAATCTGTGCTTTAGCTGCACATAGGAAATTTGCTGCACTGTTTGTGGACCGTGGGGGAATGCAAAAGCTGCTTGCTGTCCCCAGAATGGCACAGACTTTCTTTGGTCTTTCTTCTTGTCTATTCACCATCGGTTCTCTTCAGGGTATCATGGAAAGGGTTTGTGCTCTTCCATCGCAAGTTGTTTATCATGTTGTTGAGTTAGCCCTCCAACTTCTTGATTGCAATCAAGATCAAGCCCGGAAGAATGCAGCCTTGTTTTTTGCTGCGTCATTTGTCTTCAGAGCTGTTCTTGACGCCTTTGATTCCCTAGATGGATTACAGAAATTACTGGGCCTTCTAAATGATGTTGCTTCTGTAAGATCAGGAGTAAATTCTGGAGCCTTGAGTTTATCCAACTCGGGATCACTTCGAAATGACCGATCGTCTGCAGAAGTGCTGACATCATCTGAGAAGCAGATAGCTTATCACACTTGTGTTGCTTTAAGGCAATATTTCAGGGCCCATCTCCTTGTGTTAGTGGATTCCATTCGTCCTAACAAAAGCAATCGTAGTGCTGCTAGAAATATTCCAAGTGTAAGGGCAGTGTACAAACCCCTTGATATTAGTAATGAGGCAATGGATGCAGTATTCCTACAATTACAAAAAGATAGGAAACTAGGTCCTGCATTTGTCAGAACACGTTGGCCAGCAGTTGAGAAGTTCTTGGCGTCTAATGGACATGTTACTATGTTGGAATTGTGTCAGGCCCCTCCTGTGGAGCGATATCTGCATGATTTGCTTCAGTATGCTTTGGGAGTTCTGCACATTGTTACATTGGTACCTAGCAGTCGTAAGATGATTGTAAATGTAACTTTAAGCAACAATCGTGTTGGTATTGCGGTAATTTTGGATGCTGCAAATATAGCTAGTAATCATGTGGACCCCGAGATAATTCAACCAGCATTAAATGTTTTAGTCAATCTTGTTTGCCCTCCTCCTTCAATAAGCAATAAACCGGCTATGGTTGCACAAGGTCAGCAGTTGGCATCTTCCCAGACATCTAATGGTCCTCCTTCTGAGGCTCGAGACAGAAATGCTGAACGAAATTTTTCGGACCGAGCTGTTCACTCTGCTAGCCAGATTGATCCTAGGGAGAGGAATGGGGAGTCCAATGCTGTAGATCGAGGCAGTGCTGCAAGCTTAAGTACACAGCCTGTTAGTAGTACGCCACAAACTCCTGTTGCTTCTGCAGCTTCTGGATTGGTTGGTGACCGAAGGATATCTTTAGGTGCGGGAGCAGGTTGTGCAGGTCTTGCTGCACAATTGGAACAAGGATATCGTCAGGCAAGAGAGACTGTTCGCTATAATAACGGTATAAAGGTTCTTCTGCATCTCCTCCAACCACGTATATATTCACCTCCTGCTGCTCTGGACTGTCTTCGTGCTCTAGCATGTCGGGTCTTGCTTGGATTAGCCAGAGATGATGCAATTGCACACATATTGACAAAGCTTCAGGTTGGGAAAAAGCTATCAGAACTGATTCGGGATTCTGGTAGCCAAACACTTGGAACAGAGCAGGGTAGGTGGCAAGCTGAACTTTCCCAGGCTGCCATCGAGCTTATTGGGATTGTGACTAATTCAGGCCGTGCAAGTACGTTAGCTGCTACTGATGCAGCTACTTCTACTCTAAAGCGCATAGAAAGAGCAGCTATTGCTGCTGCTACTCCTATTAGTTACCATGCAAGGGAACTTTTGCTTCTAATTCATGAACACCTACAGGCATCTGGGTTGGTACAAACTGCTTCTATGTTGCTTAAAGAGGCTCAGTTTACTCCTTTGCCATTATTGGTTCCTCCCTCTTCTCTTGCACAACAACCCACAACACAGGAAGCTTCTTCAACACAAATTCAGTGGCCCTCTGGTCGTACCCCTTGTGGATTTCTCTCTAGCAAATTAAAGTTTAATGCAAAGGATGAAGATGCTGTCTTGAAAAGTGATTCTGTCTCTGCAAAGAAAAAATCACTGACTTTCTCATCATCTTTTCATTCAAGACTCCAACTTCTTGACTCTCAGCAGTCATCTGTAAGGAAATTGTCAAATACTGCTAAAGAGTCTTCAGAAACTAGTGTGGTAGAGACTGGATCCGAATCTTCAGTGAAACATAACGTTGATACTGGATCTCAGTTTAAGACTCCAACTTTGCCAGCGAAACGGAAATTATCTGATTTGAAGGACATATCAATGTTTTCTTCATCTGGAAAACGATTAAATGTTGGGGATCAAGGACTCCGCTCTCCTATTTGTTCAAGTGCAATTCGTAAAAGTAGTCTACAGCCTGATGCAGTTGGGCTTTTCACTCCAACTTGTAACCTGAAAAATCAGCATAGCCGTTGTATGGGTGATTTGTTGGACGAGAATCAGTGCAGTATATCAAATCTAGGTCAGATGACACCATCCTCCCAAGTATTAAACGACATTCAGCCCGGCAACTCTGAACGTGTAACATTAGATTCTCTAGTGGTTCAGTATTTGAAACATCAACATCGCCAATGTCCAGCTCCTATTACAACACTTCCTCCACTGTCACTTCTGCACCCGCATGTCTGTCCTGAACCAAAGCGAAGCCTTGATGCCCCTTCTAATGTGACAGCTAGGCTTGGTACGCGTGAGTTTAAATATATGTATGGGGGTGTTCATGGGAATCGCAGGGATCGTCAATTTGTTTACAGTCGGTTTAGGCCATGGCGCACTTGTCGGGATGATGCTGGTGCCTTGTTAACATGCATTACATTTGTTGGGGACTCCTCTCATATTGCTGTTGGAAGCCATAATGGGGAGCTCAAATTTTTTGAATCCAACAACAGCAATGTAGTGGAGAGCTTCACAGGTCATCAGGCTCCTTTGACTCTTGTTCAGTCTTTTGTTTCTGGTGACACCCAGCTATTACTTTCTTCAAGCTCCCAAGATGTTAGGTTGTGGGATGCAACATCAATTTTAGGTGGTCCTAGCCATTCATTTGAAGGATGCAGGGCAGCCAGGTTTAGCAATTCTGGGAACGTTTTTGCAGCCCTGTCATCAGAATCTTCACGGCGGGAGATCCTCTTATATGATATCCAGACATGTCAGTTAGAGTTGAAGTTGTCAGATACATTTGCAACTTCTACAGGGCGAGGTCACGTTTATTCTTTAATCCATTTTAACCCTTCTGACTCAATGCTGCTTTGGAATGGTGTCTTGTGGGATCGACGTGTCTCTGGGCCCGTTCATCGCTTTGATCAGTTTACGGATTATGGTGGTGGAGGCTTTCATCCTGCTGGCAACGAGGTTATTATAAACTCTGAAGTCTGGGATCTGCGGAAGTTCAGATTGCTACGCAGTGTGCCTTCATTGGATCAAACATCAATAACATTCAATGCGCGTGGTGATGTAATGTATGCTATCTTAAGGAGAAATCTTGAGGATGTAATGTCAGCAGTCCACACTCGACGCGTCAAGCATCCTCTTTTTTCAGCGTTCCGCACAGTAGATGCAATTAATTATTCTGACATTGCAACTATCCCTGTGGATCGCTGTGTTCTTGATTTTGCATCTGAGCCTACAGATTCATTTGTTGGGCTGATTACTATGGATGATCAGGATGAGATGTATGCTTCTGCCAGAATCTATGAAATTGGTCGTCGGAGGTCAACTGATGATGATTCTGATCCTGATGATGCTGAAAGTGAGGAGGAAGATGAGGATGACGATGATGATGATGGTGATGTTGATCCTCTTTTAGGCCCTGGTCTTGGTGGGGATAGTGGCAGTGATGCTGATGATATGAGCAATGATGATGAGGACGATGATAGTGTGAGTGATCTTGATGAAGATGAAGATGGAGATTTCATTTTGGATGATGTAGACTTTGATGGTGGACCAGGCATATTGGAGATTGTAACAGAAGGTGACGAAGATGATGATGATAGTCAGGTACTTGAATCCTTAAGTAGTGATGATGAGGATTTTGTGGGTAATGGCTTTGGTTATTAA 5817 0.4387 MEDQANQAPPPHDEEEDSKKEEDELIVKVNKLMEKITSAPDNPKATVLHALASILETQESRYMEENGHSLSSTARAAHVIGRLGGLIRENDEFFELISSKFLSETRYSTSIQAAAGRLLLCCSLTWIYPHVFEEPVMENIKNWVMDDNTGLLSEEQNLKHSSGRREASDSEMLKTYSTGLLAVCLVGGGQIVEDVLTSGLSAKLMRYLRLRVLGEASSNQKDVTHITETRHASANTSGRGRDDGRGRFRQLLEPNHLDDTRMIDERSLDDVTLERGPDRSISGQTIQEGSWIEGEPPDGLGEGVDVQEVDSDGEDRWRCRDIRDGRIKYSEHEDNVRDDSSRRRSNRGWGRSKGKGRVNEGTVESDPILSSPGSGSRLVQGRSVRDRSLVRNADVRRVPESKKTLGRTSLEASGFEREDHDDCFHECRIGNKDITDLVRKAVQAAEAEARSANAPEEAVKAAGDAAADLVKTAASEEYKSTNDEEAAFLAASKAASTVIDAASAVEVSRSSIGNISVTENESGKETETNEDVEEYFIPDTQSLAQLREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLALLQQNSKHREASKVALLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTFFGLSSCLFTIGSLQGIMERVCALPSQVVYHVVELALQLLDCNQDQARKNAALFFAASFVFRAVLDAFDSLDGLQKLLGLLNDVASVRSGVNSGALSLSNSGSLRNDRSSAEVLTSSEKQIAYHTCVALRQYFRAHLLVLVDSIRPNKSNRSAARNIPSVRAVYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWPAVEKFLASNGHVTMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNVTLSNNRVGIAVILDAANIASNHVDPEIIQPALNVLVNLVCPPPSISNKPAMVAQGQQLASSQTSNGPPSEARDRNAERNFSDRAVHSASQIDPRERNGESNAVDRGSAASLSTQPVSSTPQTPVASAASGLVGDRRISLGAGAGCAGLAAQLEQGYRQARETVRYNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDAIAHILTKLQVGKKLSELIRDSGSQTLGTEQGRWQAELSQAAIELIGIVTNSGRASTLAATDAATSTLKRIERAAIAAATPISYHARELLLLIHEHLQASGLVQTASMLLKEAQFTPLPLLVPPSSLAQQPTTQEASSTQIQWPSGRTPCGFLSSKLKFNAKDEDAVLKSDSVSAKKKSLTFSSSFHSRLQLLDSQQSSVRKLSNTAKESSETSVVETGSESSVKHNVDTGSQFKTPTLPAKRKLSDLKDISMFSSSGKRLNVGDQGLRSPICSSAIRKSSLQPDAVGLFTPTCNLKNQHSRCMGDLLDENQCSISNLGQMTPSSQVLNDIQPGNSERVTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVTARLGTREFKYMYGGVHGNRRDRQFVYSRFRPWRTCRDDAGALLTCITFVGDSSHIAVGSHNGELKFFESNNSNVVESFTGHQAPLTLVQSFVSGDTQLLLSSSSQDVRLWDATSILGGPSHSFEGCRAARFSNSGNVFAALSSESSRREILLYDIQTCQLELKLSDTFATSTGRGHVYSLIHFNPSDSMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHPLFSAFRTVDAINYSDIATIPVDRCVLDFASEPTDSFVGLITMDDQDEMYASARIYEIGRRRSTDDDSDPDDAESEEEDEDDDDDDGDVDPLLGPGLGGDSGSDADDMSNDDEDDDSVSDLDEDEDGDFILDDVDFDGGPGILEIVTEGDEDDDDSQVLESLSSDDEDFVGNGFGY* 1939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 989 1012 - -
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 1294 1329 - -
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 223 247 - -
Lapu9g01825 1938 SMART WD40_4 1507 1547 IPR001680 GO:0005515
Lapu9g01825 1938 SMART WD40_4 1550 1590 IPR001680 GO:0005515
Lapu9g01825 1938 SMART WD40_4 1595 1633 IPR001680 GO:0005515
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 1831 1852 - -
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 268 313 - -
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 1908 1924 - -
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 1822 1938 - -
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 364 378 - -
Lapu9g01825 1938 ProSiteProfiles LIS1 homology (LisH) motif profile. 1176 1208 IPR006594 GO:0005515
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 1867 1895 - -
Lapu9g01825 1938 SMART Lish 1176 1208 IPR006594 GO:0005515
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 331 383 - -
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 331 346 - -
Lapu9g01825 1938 SUPERFAMILY WD40 repeat-like 1509 1739 IPR036322 GO:0005515
Lapu9g01825 1938 Gene3D - 1508 1832 IPR015943 GO:0005515
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 935 1013 - -
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 1 23 - -
Lapu9g01825 1938 SUPERFAMILY ARM repeat 665 1114 IPR016024 -
Lapu9g01825 1938 MobiDBLite consensus disorder prediction 935 956 - -
Lapu9g01825 1938 FunFam DDB1-and CUL4-associated factor homolog 1 1505 1832 - -
Lapu9g01825 1938 PANTHER VPRBP PROTEIN-RELATED 15 1935 IPR033270 GO:0016567
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01825 1534 1740 U-box Gene Family AT2G33340 26.222 2.49e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01825 K11789 - gmx:100796030 3033.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01825 9 33104809 33115216 Lapu9g01825 9 33104809 33115216 ECH