Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01806 ATGGCAGTGGAATTGATGAGCTTGCCGAAAATGGAGGAACAGAAGGCAATTAAAGAAGCAGCCACGGAGGGTCTTAAGGGAATGGAAAACCTCATCCATCTCCTCTCCCATCAACCCTCCAATCTCAACGCTCAGCTCACGGACGCCACCGTTTCAAACTTCAAAAAACTCATCTCCTTAATCAACCGAACCGGCCACGCCCGTTTCCGTCGCGCACCTCTCCCTTCAAACACCCCACCCATTCCACCGGCTAGCCCGCTCACCCTCCACCAACCTCCCTCCACCTTCGCCCCCACGCACTCCCACACTCTCACTCTCGATTTCACCAAACCTAACACCTTCACCTCCACCAACGCCAACGCCAACGCCAACGCCAACTCCAACTCCGTGGATCTTGAATTCTCCAAGGAAACCTTCAGCGTCTCCTCCAACTCCTCCTTCATCTCCTCCGCCATCACCGCCGACGGCAGCGTCTCCAACGCCAACCAGGTCTCCTCTCTCTTCCTCACCCAGCCTTCTTCCGCCGGGAAACCGCCTCTCGTCAAGAAGAGGTGCCATGACCGTTCCGACGACGTCTCCGGCAAACTCTCCGGCTCCACCAAGTGCCACTGCATTAAGAGAAGGAAGAATCGGGTGAAGAAGACGGTGAGAGTGCCGGCGATTAGTACGAAAATCGCCGATATTCCCTCGGACGAGTACTCGTGGAGGAAGTACGGGCAGAAGCCGATCAAGGGATCACCGTATCCGAGGGGGTATTACAAGTGCAGTACGGTGAGAGGGTGTCCGGCGAGGAAACACGTGGAGCGTGCTTCGGACGATCCCACGATGTTGATTGTGACGTACGAGGGAGAGCACCGTCACTCTATTCAGACCACGATGCAGGACAACATTTCTGGGGCCGTGGGTTTGGTTTTTCAGTCAACGTAG 927 0.5588 MAVELMSLPKMEEQKAIKEAATEGLKGMENLIHLLSHQPSNLNAQLTDATVSNFKKLISLINRTGHARFRRAPLPSNTPPIPPASPLTLHQPPSTFAPTHSHTLTLDFTKPNTFTSTNANANANANSNSVDLEFSKETFSVSSNSSFISSAITADGSVSNANQVSSLFLTQPSSAGKPPLVKKRCHDRSDDVSGKLSGSTKCHCIKRRKNRVKKTVRVPAISTKIADIPSDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERASDDPTMLIVTYEGEHRHSIQTTMQDNISGAVGLVFQST* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01806 308 Pfam WRKY DNA -binding domain 231 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01806 308 ProSiteProfiles WRKY domain profile. 224 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01806 308 Gene3D WRKY domain 215 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01806 308 Pfam Plant zinc cluster domain 182 227 IPR018872 -
Lapu9g01806 308 FunFam WRKY transcription factor 65 213 290 - -
Lapu9g01806 308 SUPERFAMILY WRKY DNA-binding domain 227 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01806 308 MobiDBLite consensus disorder prediction 170 192 - -
Lapu9g01806 308 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 291 IPR044810 GO:0003700
Lapu9g01806 308 SMART WRKY_cls 229 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01806 Lapu-Chr9 32874100 32876006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01806 1 307 WRKY Transcription Factor Family AT2G24570 57.567 9.46e-110 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g01806 WRKY 4.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01806 - - gmx:100127394 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01806 9 32874100 32876006 Lapu9g01806 9 32874100 32876006 ECH