Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01797 ATGCTCTTCACTTGTTTTTGGCCTTCATTGGCTGACAATGCTCAAGTTTTGATGAACTTCAAAAGATCCTTGTCCAATGCTGATGCTTTAAATAACTGGGGGAACCAATCAATTGGTGTGTGCAGCTGGACTGGTATATTATGTTTCAATCAAAATTTTCATGGCTTGAGATTAGAAAATATGGGACTGAGTGGCAGTGTTGACGTAGACACGCTGCTTCAGTTGTCCAATTTGAACAGCTTTAGTGTCATTAACAACAACTTTGATGGTCCAATGCCTGAATTCAAGAAGCTTTTGAATTTAAGGGCGTTGTTTCTGAGCAATAACAAGTTCTCTGGTGAAATTCCAGATGATGCTTTTGAAGGCATGAAACGTCTTAAGAGAGTATTCTTGGCTGAAAATGGCTTCACGGGTCATATTCCTACTTCCCTTGTTAAATTGCCTAAACTTTTGGATGTGGACATACATGGAAATAGTTTTGAAGGAAACATACCAGAATTTCAACAGAGGGATTTCAGAGTGTTTAATTTGTCTTACAACAAGTTTGAGGGTCAAATACCAGAAAGCTTAAGCAGCAAGGATCCAGGCTCATTTACTGGCAATCTAGGTCTATGTGGAAAGCCTCTAGGCCCCTGCATTGGAAGCCCCACCCCACCCCCGGACACTGATCAACACCCAAATTCACGTCCAGAAAAAGATAACAAGAAAAAACGCGTTATTTTAACAGTTATTGTAGTGGTGGTGGTGATTGTGCTGGCTTCAATACTAGCACTCCTGTTCATCCGTTACCGTCGAAAGAAACCCGTACTGGTCAAAGATTCACAGCCCCAGAACGTTACTCCGCTTTCTAGCGAGTCCAAATCCATTGTTGTGACAACTGAATCCAAGAAAAGTGAAGACGGAGGGTTGAATTTCGTTAGGAACGAGAGGGAGGGGATTGACATGCAAGACTTGCTAAGGGCCTCGGCTGAGGTTCTGGGGAGTGGCAGTTTTGGATCCACGTACAAGGCCATGCTTCTGAACGGGCCAGTGGTGGTGGTGAAGAGATTCAAGCACATGAACAACGTGGGGAAGAAAGAGTTTTTTGAGCACATGAACAGGCTTGGAAAATTGTCACACACCAATCTACTTCCTCTCGTCGCATTCTATTACGGAAAAGAAGAGAAGCTTCTGGTTCATGACTTCGCTGAAAATGGCAGCTTGGCCAGTCATCTTCATGGAAGAAGTGGTGGTGAGTTGAGCTGGGGAACTCGTTTGAAGATCATAAAAGGAGTGGCGAGGGGGTTGGCTTATCTTTACACGGAGTTCCCCGACCAAGCTTTACCACACGGTCATCTGAAATCGTCAAACGTTGTATTGGACGGTTCCTTCGAGGCTCGTTTGGCAGAGTACGGACTTGTGAAAGTGGTGGAGAAGAGCCATGCTCAGCAGTTCATGGTGGCTTACAAGTCTCCAGAGGCGAGTCAGTTGGAGAGGCCGAGCGAGAAGAGCGATATCTGGTGTCTGGGGATTCTGATACTGGAGCTTTTGACGGGGAAGTTCCCTGCGAATTATCTGAGGCATGGGAAGGGAGCGAGTGAGGATTTGGCGGCGTGGGTGAACTCGATAGTGAGGGAAGGGTGGAGTGGGGAGGTGCTTGATAAGGGGATTCCTGGGAGGGGAAGTGGAGAGGGTGAGATGGTGAAGCTGTTGAGAATTGGAATGGGGTGCTGTGAATGGAGCTTGGAGAGTAGGTGGGGCTGGAAGGAGGCTGTGGCAAAGATTGAGGAGTTAAAGGAGAGTGATGGTGGTGGTGAAGGTGAAGGTGAAGGGGATAATCTCTACTCACTCTCTACCAGTCTTGATGACTTCTCTCTCTCTCACTCCACTTCATGA 1875 0.4651 MLFTCFWPSLADNAQVLMNFKRSLSNADALNNWGNQSIGVCSWTGILCFNQNFHGLRLENMGLSGSVDVDTLLQLSNLNSFSVINNNFDGPMPEFKKLLNLRALFLSNNKFSGEIPDDAFEGMKRLKRVFLAENGFTGHIPTSLVKLPKLLDVDIHGNSFEGNIPEFQQRDFRVFNLSYNKFEGQIPESLSSKDPGSFTGNLGLCGKPLGPCIGSPTPPPDTDQHPNSRPEKDNKKKRVILTVIVVVVVIVLASILALLFIRYRRKKPVLVKDSQPQNVTPLSSESKSIVVTTESKKSEDGGLNFVRNEREGIDMQDLLRASAEVLGSGSFGSTYKAMLLNGPVVVVKRFKHMNNVGKKEFFEHMNRLGKLSHTNLLPLVAFYYGKEEKLLVHDFAENGSLASHLHGRSGGELSWGTRLKIIKGVARGLAYLYTEFPDQALPHGHLKSSNVVLDGSFEARLAEYGLVKVVEKSHAQQFMVAYKSPEASQLERPSEKSDIWCLGILILELLTGKFPANYLRHGKGASEDLAAWVNSIVREGWSGEVLDKGIPGRGSGEGEMVKLLRIGMGCCEWSLESRWGWKEAVAKIEELKESDGGGEGEGEGDNLYSLSTSLDDFSLSHSTS* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01797 624 SUPERFAMILY L domain-like 12 192 - -
Lapu9g01797 624 MobiDBLite consensus disorder prediction 606 624 - -
Lapu9g01797 624 Gene3D Ribonuclease Inhibitor 12 121 IPR032675 -
Lapu9g01797 624 ProSiteProfiles Protein kinase domain profile. 320 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01797 624 SUPERFAMILY Protein kinase-like (PK-like) 324 589 IPR011009 -
Lapu9g01797 624 Pfam Leucine rich repeat N-terminal domain 12 48 IPR013210 -
Lapu9g01797 624 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 595 IPR046959 -
Lapu9g01797 624 Pfam Protein kinase domain 323 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01797 624 Gene3D Phosphorylase Kinase; domain 1 286 395 - -
Lapu9g01797 624 MobiDBLite consensus disorder prediction 591 624 - -
Lapu9g01797 624 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Lapu9g01797 624 Gene3D Transferase(Phosphotransferase) domain 1 396 601 - -
Lapu9g01797 624 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 69 164 - -
Lapu9g01797 624 MobiDBLite consensus disorder prediction 209 233 - -
Lapu9g01797 624 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Lapu9g01797 624 Gene3D Ribonuclease Inhibitor 122 215 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01797 Lapu-Chr9 32797507 32799977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01797 13 616 Receptor kinase-like Gene Family AT5G35390 46.105 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu9g01797 Pkinase 9.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01797 - - gmx:100803999 972.615