Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01789 ATGTCCATGGATCCTCCTAAGAAACCTAACAAGATCAGAGAAATAGTGAGGCTTCAACAGATTCTTAAGAAATGGAGAAGGGCAGCAAACTCTTCAAAAACAAGCAGAAGTAACAACAACAACACCAGCAACAACACCAGCAGAAGCATCAAATTTCTCAAAAGAACACTTTCTCTGTCTGAACGTGAGGGAGGAGGATCGAGCAGTGTTGTTCCCAAGGGCTACGTTGCCGTTTGTGTTGGCGTGGACCTTAGCAGGTTCGTTATACCAACCGAGTATTTGGGTCACCAAGCCTTTCACATGTTACTCAGAGAAGCTGAGGAAGAGTTTGGGTTTGAACAAACTGGGGTTCTCAGAATTCCTTGTGAAGTGTCCGTGTTCGAGAGTATCTTGAAGATAGTGGAGAGAAAGGACAAGTTTTTCACTCAGAAATGCAAATTTAGCATTGAGAAAATGATGGGATACTGTTCCTCCAACCACCTTGATTATTCTCATCACCCTCAAAGTCCAATGTGCAGATAG 522 0.433 MSMDPPKKPNKIREIVRLQQILKKWRRAANSSKTSRSNNNNTSNNTSRSIKFLKRTLSLSEREGGGSSSVVPKGYVAVCVGVDLSRFVIPTEYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKIVERKDKFFTQKCKFSIEKMMGYCSSNHLDYSHHPQSPMCR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01789 173 Pfam Auxin responsive protein 30 133 IPR003676 GO:0009733
Lapu9g01789 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 45 130 IPR003676 GO:0009733
Lapu9g01789 173 MobiDBLite consensus disorder prediction 26 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01789 Lapu-Chr9 32764666 32765187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01789 7 173 Calmodulin-binding Proteins AT4G31320 53.093 6.44e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01789 K14488 - pvu:PHAVU_009G103800g 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01789 9 32764666 32765187 Lapu9g01789 9 32764666 32765187 ECH