Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01783 ATGCAAAAGGAAAAGGAAGCCATTATCAAGGAGGGAACGGATATAGAAATGGAAAGAACTCAGGCAAAAGAGGAAACCCTACCACCGGGATTTCGATTTCATCCTACCGATGAAGAACTTATCACTTGCTATCTCGTGAATAAGATATCGGATTCTAATTTTACAGGCCGAGCAGTAACTGATGTAGATCTCAACAAATGTGAGCCATGGGAGCTTCCAGGGAAAGCTAAGATGGGTGAAAAAGAATGGTACTTCTTCAGTCTGAGAGACCGTAAATACCCGACTGGTGTTAGAACCAATCGAGCAACGAACACAGGGTATTGGAAGACCACAGGGAAAGACAAGGAGATCCTCAACAGTGCAACATCGGAATTGATCGGCATGAAGAAGACTTTAGTTTTCTACAAAGGAAGAGCTCCTAGAGGAGAGAAAAGCAACTGGGTCATGCATGAATACCGCATTCACTCGAAATCCAGCTTTAGAACTACCAGGCAGGATGAATGGGTGATTTGCAGGGTGTTCAAGAAGAGTGGTGGCGCAAAAAAGTTCCCTTCTTCAAACCATGCAAGAGCAGTGAATCCTTACAGCTTGGAAATAGGGCCAAATATTATGCCAACACCCATGATGCAATTGGGAGATCCTGCTGCTCATTTCCTTTATGGACGGAACTACATGAGCAGTGCTGAGTTAGGTGAACTTGCTAGGGTTTTAAGAGGTGGTGGATCAACAAGTAGTGTCAATCAACCAATGCAATCCCAATTGGGTTACCCTACATCAGCAGCAGGAGGAGGATTCACCATTTCAGGACTCAATTTGAATCTGGGAGGAGGAGGAGCAACAACCACAACACAACCCATTTTGCGACCGATGCAACCTTCTTCTGCTCCTGTTCATACAATGGCTCAAGTACTTGATGTCAATTCCAGCATGATGACAACCGGTTCTCTTGGTCCAGAGAATGTAGGTTATGGATCAGAAATGATTAACATGAATTCTCATGGGAATAGGTTTATGGGCATGGACCATTGCATGGATCTAGACAACTATTGGCCTTCCTACTAA 1062 0.4426 MQKEKEAIIKEGTDIEMERTQAKEETLPPGFRFHPTDEELITCYLVNKISDSNFTGRAVTDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSATSELIGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSSFRTTRQDEWVICRVFKKSGGAKKFPSSNHARAVNPYSLEIGPNIMPTPMMQLGDPAAHFLYGRNYMSSAELGELARVLRGGGSTSSVNQPMQSQLGYPTSAAGGGFTISGLNLNLGGGGATTTTQPILRPMQPSSAPVHTMAQVLDVNSSMMTTGSLGPENVGYGSEMINMNSHGNRFMGMDHCMDLDNYWPSY* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01783 353 SUPERFAMILY NAC domain 19 176 IPR036093 GO:0003677|GO:0006355
Lapu9g01783 353 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 227 - -
Lapu9g01783 353 FunFam NAC domain-containing protein 100-like 36 180 - -
Lapu9g01783 353 Gene3D NAC domain 36 179 IPR036093 GO:0003677|GO:0006355
Lapu9g01783 353 Pfam No apical meristem (NAM) protein 28 154 IPR003441 GO:0003677|GO:0006355
Lapu9g01783 353 ProSiteProfiles NAC domain profile. 27 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01783 Lapu-Chr9 32702155 32704453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01783 16 353 NAC Transcription Factor Family AT2G24430 52.222 4.00e-114 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu9g01783 NAM 5.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01783 - - gmx:100804931 640.573