Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01779 ATGGAAAGGGAACGTACGAGGAAACGCCCTCGTCTCGCATGGGACGTAGCCCCTCCTCCCTCAGAGCCCGAGCCTCAACTGCCTCTGGCGGTACCTGGTGACGAAGGAATTGAAAGAAAGCACGTTTCACCTCCAAGAAGGGACGACGATCGCGAAGGACATTATGTCTTCAATCTTGGCGAAAATCTCACTCCTAGATATAAAATCCTCGGCAAGATGGGTGAAGGCACATTTGGTCGGGTATTGGAATGTTGGGACCGCCAAACTAGAGAATATGTGGCTATCAAGGTAGTTAGAAGCATACGGAAGTATCGAGATGCAGCAATGCTCGAGGTTGATGTGCTTCAACATCTAGCAAAGAATGATAGGGAAAATTCACGATGTGTGCAGATCCGAAATTGGTTTGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGCCTAATCCACACTGACCTGAAGCCAGAAAATATACTTCTAGTTTCATCTGAATATGTAAAGCTCCCTAGCTATAAGAGAGTTTCCTCAGATGAAACGCAGTTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATATGATAATCAGAATCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAAATTATTCTAGGTCTAGGGTGGTCATATCCATGTGATCTGTGGAGTGTTGGATGTATTCTTATAGAACTATGCTCGGGTGAAGCATTGTTTCAGACTCATGAAAACTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTATTCCGGAGCACATGATTCGAACGTCCAATAAGGGTGCAGAAAAGTATTTCAAGCGTGGATCAAGACTAAGATGGCCTGAAGGAGCTGTTTCAAGGGAGAGCATCAATGCAGTAAAGAAGCTTGGTCATCTGAAGGATATTGTATCTCGAAGTGTGGACTCTTCAAGGTCCTCCTTATCTAACCTGTTACATGGCTTATTATCATATGACCCAACCAAACGGCTAACAGCTCTTCAAGCCCTCGATCACCCCTTCTTTAGGAATCCAACCTGA 1191 0.4425 MERERTRKRPRLAWDVAPPPSEPEPQLPLAVPGDEGIERKHVSPPRRDDDREGHYVFNLGENLTPRYKILGKMGEGTFGRVLECWDRQTREYVAIKVVRSIRKYRDAAMLEVDVLQHLAKNDRENSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYVKLPSYKRVSSDETQFRCLPKSSAIKLIDFGSTAYDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPEHMIRTSNKGAEKYFKRGSRLRWPEGAVSRESINAVKKLGHLKDIVSRSVDSSRSSLSNLLHGLLSYDPTKRLTALQALDHPFFRNPT* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01779 396 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 38 394 - -
Lapu9g01779 396 MobiDBLite consensus disorder prediction 1 53 - -
Lapu9g01779 396 FunFam Serine/threonine-protein kinase AFC2 143 392 - -
Lapu9g01779 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Lapu9g01779 396 Gene3D Transferase(Phosphotransferase) domain 1 121 392 - -
Lapu9g01779 396 MobiDBLite consensus disorder prediction 34 53 - -
Lapu9g01779 396 Pfam Protein kinase domain 67 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01779 396 SMART serkin_6 67 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01779 396 CDD PKc_CLK 54 392 - -
Lapu9g01779 396 Gene3D Phosphorylase Kinase; domain 1 54 147 - -
Lapu9g01779 396 ProSiteProfiles Protein kinase domain profile. 67 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01779 396 SUPERFAMILY Protein kinase-like (PK-like) 54 394 IPR011009 -
Lapu9g01779 396 FunFam Serine/threonine-protein kinase AFC2 54 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01779 Lapu-Chr9 32680450 32684295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01779 231 395 EF-hand Containing Proteins AT5G22840 32.044 4.25e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lapu9g01779 Pkinase 7.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01779 K08287 - gmx:100782453 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01779 9 32680450 32684295 Lapu9g01779 9 32680450 32684295 ECH