Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01767 ATGTTTGCAGCTACACCATATTCTCCGGTGACCACGCCGGCTGACGTCATCCCTCCGCCGTTGCCGCAACCAGCACCGCCCCCATTCCATTCCTCGCCGTCACCATCGATGTTTCTGACACCTCCAGCCCCGTCCTCGCCGTCGCCGGAAACTTTAGTCGTCCAAGATTCGCCGCCACCGCCGTCTTCAGTTACACCGCTTCCTCTGACGGTGCCGTTGTTGCCGTCTCCGTCGCCGGAATCTCTCACACCGCCATTTCCGCCGTTCGCAGTTTCACCGTCGCCTCCGGCTCCGACCGTCGCATCTCAGCCACCGCCGTTTCCGTATGCCACAGCGCCTTCAACGACGTCGTTTCCGCCGTTTTCACTTGCGCCATCGCCTCCGTCTCCGACCGCCAATTTTCCACCTGCATTGCCAGATATGCCTCTGGCACCAGAGGCGGCGACAGTGACTGTTCCTCCACCGCCTTTACCCCCTTCTTTTACGGCGGAACCAACCTTGGCAACGCCGTGGAGCCCGGCGTTGCCCTTATCGGCACCGGAAGTGAATTTGCCGTTGGCTGTGGACTTTCAGAAGGCCTCAACATTCCACGTGTCAAGTGGGCTCACTGTTGGGCTTGTAATTGGAGCAATCGTTTTGGTGTTTGTTTTTAGTGTTGGATTAGTTCTATGCAGGAATAGGAAGAAAAACAAACAGAAGAATCTATGCACGGGTCGCTCTAAGGAATCACCACCCTCTGTTGAATCCAAGGGATCTCATGTTATTCGAGTGCCATCAAATTCAACGCTGCCACCACATCTCACATCAGGTTCTTTTAGTTCAGTGTCTGTTAAAGCAATTCCGAACCATGCTCCAAGGGCAGCCTTCGATCCCGGGAATAGTAGTTTCACGTATGATGAAATATTAGTGGCCACTAATTGTTTCTCTGAGTCCAACCTTCTTGGAGAAGGTGGCTTTGGCTATGTGTACAAAGGAGTTCTCCCATGCGGAAAGCAAATTGCGGTTAAGCAGCTAAAATTAGGAAGCCAACAAGGAGAGAGAGAATTTCAAGCTGAGGTTGAGACAATTAGCCGAGTGCATCATAAACATCTTGTTGAATTGGTTGGCTACTGCGTTACTGGGGCAGAGAGAATGCTTGTTTATGAATTTGTTCCAAATGACACATTGGAATTTCACTTGCACGGGGAGGGGAAGATCTTATTAGGATGGACAACGAGAATTAAAATTGCCCTCGGATCTGCAAAAGGGCTAGCATATCTACATGAAGATTGTAATCCAGCAATTATTCACCGTGATATTAAAGCATCTAACATTCTTCTTGATTTTAAGTTCGAACCCAAGGTTTCTGACTTTGGCCTGGCAAAAATCTTGCCAAACACGGATAGTCGCATTAGTCACCTCACCACCCGAGTGATGGGAACCTTTGGATATCTGGCTCCGGAGTATGCATCAAGTGGTAAATTGACTGATAAATCAGATGTATATTCCTACGGCATCATGCTTTTAGAACTTATAACCGGACGTCCACCAATCACTGCAGCAGGATCAAGGAATGAGAGCTTGGTTGACTGGGCTAGGCCATTGCTTGCTCGAGCACTACAAGATGATGACTTCGACAACCTTGTTGATCCAAGGTTGCAGAAAAATTACGATGCTGATGAGATGGTTAGAATGATTACATGTGCAGCTGCTTGTGTGCGTCATCCATCCAGACTTCGACCTCGTATGAGCCAAATAGTTGGAGCCTTAGAAGGAGTGGTTTCTCTTACCGACCTTGTTGGAGATGTTACACCGGGGCATACCACAGTACACAATTGGTCAAATTATTTAGATTATGGTGCCAACCAATACCAGCAGGACTTAAGAAGTTTCAATTTGGCATTATCGTCGAAATACAGCTCCAGTGGGTACAGTGAAACCACTAGTGTTTATGGCCTTTACCCATCAGGCTCAAGTAGTGAGGCTCACCAATCATTCCGAGACATAATATGA 1992 0.4859 MFAATPYSPVTTPADVIPPPLPQPAPPPFHSSPSPSMFLTPPAPSSPSPETLVVQDSPPPPSSVTPLPLTVPLLPSPSPESLTPPFPPFAVSPSPPAPTVASQPPPFPYATAPSTTSFPPFSLAPSPPSPTANFPPALPDMPLAPEAATVTVPPPPLPPSFTAEPTLATPWSPALPLSAPEVNLPLAVDFQKASTFHVSSGLTVGLVIGAIVLVFVFSVGLVLCRNRKKNKQKNLCTGRSKESPPSVESKGSHVIRVPSNSTLPPHLTSGSFSSVSVKAIPNHAPRAAFDPGNSSFTYDEILVATNCFSESNLLGEGGFGYVYKGVLPCGKQIAVKQLKLGSQQGEREFQAEVETISRVHHKHLVELVGYCVTGAERMLVYEFVPNDTLEFHLHGEGKILLGWTTRIKIALGSAKGLAYLHEDCNPAIIHRDIKASNILLDFKFEPKVSDFGLAKILPNTDSRISHLTTRVMGTFGYLAPEYASSGKLTDKSDVYSYGIMLLELITGRPPITAAGSRNESLVDWARPLLARALQDDDFDNLVDPRLQKNYDADEMVRMITCAAACVRHPSRLRPRMSQIVGALEGVVSLTDLVGDVTPGHTTVHNWSNYLDYGANQYQQDLRSFNLALSSKYSSSGYSETTSVYGLYPSGSSSEAHQSFRDII* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01767 663 MobiDBLite consensus disorder prediction 233 266 - -
Lapu9g01767 663 SMART serkin_6 308 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01767 663 SUPERFAMILY Protein kinase-like (PK-like) 289 583 IPR011009 -
Lapu9g01767 663 Gene3D Transferase(Phosphotransferase) domain 1 384 592 - -
Lapu9g01767 663 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Lapu9g01767 663 PRINTS Proline rich extensin signature 19 35 - -
Lapu9g01767 663 PRINTS Proline rich extensin signature 47 59 - -
Lapu9g01767 663 PRINTS Proline rich extensin signature 80 96 - -
Lapu9g01767 663 PRINTS Proline rich extensin signature 59 80 - -
Lapu9g01767 663 Pfam Protein kinase domain 309 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01767 663 ProSiteProfiles Protein kinase domain profile. 308 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01767 663 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 211 624 IPR047117 -
Lapu9g01767 663 CDD STKc_IRAK 314 585 - -
Lapu9g01767 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Lapu9g01767 663 MobiDBLite consensus disorder prediction 237 266 - -
Lapu9g01767 663 MobiDBLite consensus disorder prediction 1 112 - -
Lapu9g01767 663 MobiDBLite consensus disorder prediction 12 112 - -
Lapu9g01767 663 FunFam proline-rich receptor-like protein kinase PERK8 384 598 - -
Lapu9g01767 663 FunFam Proline-rich receptor-like protein kinase PERK8 281 383 - -
Lapu9g01767 663 Gene3D Phosphorylase Kinase; domain 1 272 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01767 Lapu-Chr9 32538638 32543249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01767 252 657 Trihelix Transcription Factor Family AT4G32710 57.908 1.38e-144 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lapu9g01767 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01767 - - vum:124823967 926.391