Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01762 ATGGAAGGTGAAAGGGCAATCATTGCTGTAGATGGGGTGACAGATGGCGTTCAGAAAATTAGAGCCTTGCACAGGAGGACTACTGGCCCTACAAGGCGCTCTACAAAAGGACAATGGACACCTGAAGAGGATGAGATTTTGCGGAAGGCTGTCCAGCGTTTTAAAGGAAAGAACTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAATGCTTGCATAGGTGGCAGAAAGTCTTGAATCCAGAACTTGTCAAAGGTCCATGGTCTAAGGAGGAGGATGAAATAATTATCGATTTGGTGAATCAATTTGGGCCCAAGAAGTGGTCTACTATCGCACAGAAGTTACCTGGACGTATCGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTACTATAAATAAGGAAGCATGGACGCAGGAAGAGGAGTTGGCTCTCATACGTGCGCATCAGATCTATGGGAACAAATGGGCAGAATTAGCGAAGATATTGCCTGGAAGGACAGACAATGCTATAAAAAACCATTGGAACAGTTCCGTAAAGAAGAAATTGGATTCTTACTTGGCATCAGGCTTGCTTTCTCAGTTACAAAATGTCCCACTTGCTGGAAATCCGAATCAACCAATTGCTTCAATCTCTTCGAGGTTGCAGCAGAGTGGAGAAGATAATGGACCGAGGGGGACTGAAGGAGAGGAAGTTTCACAGTGTAGCCAGGAGTCAGCCAATGCTAGTTACTTTTCATCAGCCAGAGAGATGAATAGTATTGTTTTATACACTGGAGATGAGTACAGGCCAAGTGAAGAACCTATTCAAGCATCCTGTTCAGAGCCATGTTACGTGTCTCTGGATGAAGTAACTGCATCCATTCCAGACATGGCTGGCCAAGAGATTTGCACTTCTCAATTCGTTGAACAGAAATATTCACACATCCCTAGAAATTCCAATAACGGGGAAGGGCAACTTGATTTAATTGACTTGACCAATATTTCTTCACTGGAATTTGGACAGGAATCATCACAGTTGCAAAATGATTGCATGATGATTGTTCCGTTTCAGTCTATGGACTCTGTTAAGCCCGAACACACGTTGATGTCTGACGATGAATGTTGCAGAATCCTATTTTCAGAAGCAATAAGCGATGAATGTTTTTCTTCTGAAGATTATAATAAAGGTGTGAATGTGGTTGACTTGTTAGGAGGCTCCTCACTTCTTTGTCAGTCATCATTGCCGTCTGTCTCCTCTGTTGTTTCTTCTACTGGAGATAGGTTGATGTATACGGCGGAAGCCAATCAGTTGGTTGGTTCTGACGATCAGCAGTTTGTCCCCAGAACGCAGGATAACATAATTTATGCTAGTGACTTGTCCAGTCCTCCTCGAATCCATAGGATAGACACCGCTGAAATGCAACAGCCATTAAATGTTGTTAAAGATGATTCAAAATTGGTCCCTGTAAATAGTTTTGGCTGTGGATCAGATGCAAAGTCAACTTCATATCCAACGGGCGAAAATTCAAATGTGCATACAGAACATGACACAGGTGCTCTATGTTATGAACCTCCCCGCTTTCCAAGCTTGGACATTCCTTTCTTAAGCTGTGATCTTATACAATCTGGGGGCGATATGCAGCAAGAATTCAGTCCACTTGGAATCCGCCAATTTATGATGTCTTCTATGAACTGTCTAACTCCTTTTAAATTATGGGACTCACCTTCTCGGGATGATAGCCCAGATGCTTTGTTAAAAAGTGCAGCTAAAACCTTCACAGGTACACCATCTATATTAAAGAAACGAAACCGAGATCTCTTATCTCCACTCTCGGATAAAAGAATTGACAAGAAGCTTGAGATTGAAATGACATCAACCTTGATAAAAAACTTTTCCCGATTGGATGTCATGTTTGATGACAATGAGACTCAGGGAGCAGATTTGCTTTCTCCATCTTCAATGCCAAAAAGGGACCCTGGTACCTCTGTTGAAGATGATAAAGAGAATTGTGGACAAGCTGTTAAAGTGGAACGAGAAGAGGAAAAGAATAAGTCTGCTATTTTGGACGACAACAAATCTGAAAAAGATTCTGGTGATGTTGATTCTGCGATAGAGAATGGTGGTAGTACTACTGCTGAGATTGTGCAACAACCATCTGGAGTTTTGGTTGAACATGATATGAACGACCTATCAATGTATTCACCAGATCAAGTAAATTTGAAACCAGAAAGAGTTCTTAGTTTAAGTGCTAGAACTAAAAAAAATCCATCCTCAAGGATTAATTCACCACCGTCTGTTTGGTTAAAAAAGGAGCATGAAAGACTATCAGTTGCCGTTACTTGTATACATTCTGTCAGTTCATCAGGCTCAGGGGAGAATTCGGGTGATCACACTGGAAACGATGGTGGTCTTGAAACATGTTGCATATTTGGTGGAACACCGTTTAGGAAAAGCATTGAATCGCCTTCAGCGTGGAAATCTCCTTGGTTCATCAACACTTTTTTGTCCAGCCCCAGGATTGATACTGAAATTACAATTGAGGATTTTGGGTATTTTATGAGCCCTGGTGACAGAAGCTATGATGCAATCGGGTTGATGAAACAGATCAATGAACAAACTGCTGCTCAGTATGCCAGTGCTCATGAGATCTTAGGAAATGAAACTCCTAAGGCGTTACCTAAAGATAAGTCCAGAAACGATGGGGAGGATGAAGACCGAGAAGATAACGATCGTAATAATCAGCATGGGGACCATTCTCAGTCGGCTTCAAGTGCCTTGGTGCAACGACGCGTGCTTGACTTTAGCGAATGTGGATCTCCGGTTAAAGGTGATAGCAGCAAATCCTCAGCTATTAGCTTCTCAAGCCCAACTTCATATTTGTTGAAGGGCTGTAGATAA 2898 0.4203 MEGERAIIAVDGVTDGVQKIRALHRRTTGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNQFGPKKWSTIAQKLPGRIGKQCRERWHNHLNPTINKEAWTQEEELALIRAHQIYGNKWAELAKILPGRTDNAIKNHWNSSVKKKLDSYLASGLLSQLQNVPLAGNPNQPIASISSRLQQSGEDNGPRGTEGEEVSQCSQESANASYFSSAREMNSIVLYTGDEYRPSEEPIQASCSEPCYVSLDEVTASIPDMAGQEICTSQFVEQKYSHIPRNSNNGEGQLDLIDLTNISSLEFGQESSQLQNDCMMIVPFQSMDSVKPEHTLMSDDECCRILFSEAISDECFSSEDYNKGVNVVDLLGGSSLLCQSSLPSVSSVVSSTGDRLMYTAEANQLVGSDDQQFVPRTQDNIIYASDLSSPPRIHRIDTAEMQQPLNVVKDDSKLVPVNSFGCGSDAKSTSYPTGENSNVHTEHDTGALCYEPPRFPSLDIPFLSCDLIQSGGDMQQEFSPLGIRQFMMSSMNCLTPFKLWDSPSRDDSPDALLKSAAKTFTGTPSILKKRNRDLLSPLSDKRIDKKLEIEMTSTLIKNFSRLDVMFDDNETQGADLLSPSSMPKRDPGTSVEDDKENCGQAVKVEREEEKNKSAILDDNKSEKDSGDVDSAIENGGSTTAEIVQQPSGVLVEHDMNDLSMYSPDQVNLKPERVLSLSARTKKNPSSRINSPPSVWLKKEHERLSVAVTCIHSVSSSGSGENSGDHTGNDGGLETCCIFGGTPFRKSIESPSAWKSPWFINTFLSSPRIDTEITIEDFGYFMSPGDRSYDAIGLMKQINEQTAAQYASAHEILGNETPKALPKDKSRNDGEDEDREDNDRNNQHGDHSQSASSALVQRRVLDFSECGSPVKGDSSKSSAISFSSPTSYLLKGCR* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01762 965 MobiDBLite consensus disorder prediction 941 959 - -
Lapu9g01762 965 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 82 IPR017930 -
Lapu9g01762 965 FunFam Transcriptional activator Myb isoform A 88 140 - -
Lapu9g01762 965 MobiDBLite consensus disorder prediction 643 706 - -
Lapu9g01762 965 Gene3D - 141 203 - -
Lapu9g01762 965 MobiDBLite consensus disorder prediction 883 925 - -
Lapu9g01762 965 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 139 189 IPR017930 -
Lapu9g01762 965 Gene3D - 35 87 - -
Lapu9g01762 965 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 138 IPR017930 -
Lapu9g01762 965 Pfam Myb-like DNA-binding domain 140 182 IPR001005 -
Lapu9g01762 965 Pfam Myb-like DNA-binding domain 36 82 IPR001005 -
Lapu9g01762 965 Pfam Myb-like DNA-binding domain 88 134 IPR001005 -
Lapu9g01762 965 MobiDBLite consensus disorder prediction 888 915 - -
Lapu9g01762 965 FunFam Transcriptional activator Myb isoform A 35 87 - -
Lapu9g01762 965 MobiDBLite consensus disorder prediction 937 965 - -
Lapu9g01762 965 Gene3D - 88 139 - -
Lapu9g01762 965 PANTHER MYB PROTEIN-RELATED 36 109 - -
Lapu9g01762 965 MobiDBLite consensus disorder prediction 220 245 - -
Lapu9g01762 965 ProSiteProfiles Myb-like domain profile. 83 134 IPR001005 -
Lapu9g01762 965 CDD SANT 142 182 IPR001005 -
Lapu9g01762 965 ProSiteProfiles Myb-like domain profile. 135 185 IPR001005 -
Lapu9g01762 965 SUPERFAMILY Homeodomain-like 32 88 IPR009057 -
Lapu9g01762 965 ProSiteProfiles Myb-like domain profile. 31 82 IPR001005 -
Lapu9g01762 965 CDD SANT 39 82 IPR001005 -
Lapu9g01762 965 SUPERFAMILY Homeodomain-like 85 181 IPR009057 -
Lapu9g01762 965 CDD SANT 90 134 IPR001005 -
Lapu9g01762 965 MobiDBLite consensus disorder prediction 659 701 - -
Lapu9g01762 965 SMART sant 35 84 IPR001005 -
Lapu9g01762 965 SMART sant 87 136 IPR001005 -
Lapu9g01762 965 SMART sant 139 187 IPR001005 -
Lapu9g01762 965 FunFam Transcription factor MYB3R-2 141 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01762 Lapu-Chr9 32482195 32489877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01762 20 965 MYB Transcription Factor Family AT4G32730 44.020 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu9g01762 Myb_DNA-binding 2.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01762 - K09420 gmx:100811335 1582.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01762 9 32482195 32489877 Lapu9g01762 9 32482195 32489877 ECH