Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01729 ATGGAAGCACAAGAGTTCTTCCAGAACACCTTCTACCCCCAATTCCCCTCCGACAACATCACCCCCTCTAACGCCAACACCTCCGCCACCGACCACTTCATCGTCGAAGACTTCTTCGACTTCTCCAACAACGACGACCCTCCTCTCACCGACGCCACCTTCGACTCTCTCCCCACTGACCACTCTCCCACCGTCACCAACCTTGACAGCACCACCAACAACTCCAATTTCACGCCCACTGATAGTCATTTCTCCGGTGACCTCTCCGTCCCGTATGATGATCTTGCTGAATTGGAATGGCTGTCGAAATTTGCGGAGGAATCGTTTTCGAGCGAGGATTTGCAGAAGCTGCAGCTGATATCTGGTGCTGGAGTGCAAAAGGATGCTTCATCGGAAACACGTGACCCGAATCCAACTCTGTTCAACCCGCAAGTGTCGGTTCGGGGCAAGGCCAGGAGCAAGCGGACTCGTGGGCCACCATGCAATTGGACCTCTCGCCTCGTTGTCCTCTCTCCGAACACCACGTCTGAGTCTTCCCATTCGGACGGTGGTAAGAAGACTGCTCCACGGAGGAGGGATGTGAGCGAGGGCAGCAGTGAAGGCAGGAAGTGTCTGCATTGCGCGACGGACAAGACGCCACAGTGGCGGACTGGTCCCATGGGTCCAAAAACACTCTGCAATGCATGCGGGGTGAGGTACAAGTCGGGCAGACTGGTGCCCGAGTACAGGCCCGCCGCAAGCCCGACTTTCGTGCTGACAAAGCATTCAAACTCCCACCGGAAAGTGTTGGAGCTGCGGCGGCAGAAGGAAATGGTGAGGGTCCAGCAGCAGCAGTTGCTCCATCTGCAACATCAGCAGAACATGATGTTCGATGTTCCATCCAATGGAGAGGATTACTTGATCCATCAGCACATGGGCCCCGACTTCACGCACCTCATCTAA 942 0.5563 MEAQEFFQNTFYPQFPSDNITPSNANTSATDHFIVEDFFDFSNNDDPPLTDATFDSLPTDHSPTVTNLDSTTNNSNFTPTDSHFSGDLSVPYDDLAELEWLSKFAEESFSSEDLQKLQLISGAGVQKDASSETRDPNPTLFNPQVSVRGKARSKRTRGPPCNWTSRLVVLSPNTTSESSHSDGGKKTAPRRRDVSEGSSEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEMVRVQQQQLLHLQHQQNMMFDVPSNGEDYLIHQHMGPDFTHLI* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01729 313 FunFam GATA transcription factor 195 280 - -
Lapu9g01729 313 MobiDBLite consensus disorder prediction 55 85 - -
Lapu9g01729 313 MobiDBLite consensus disorder prediction 166 182 - -
Lapu9g01729 313 PANTHER GATA TRANSCRIPTION FACTOR 22 277 - -
Lapu9g01729 313 ProSitePatterns GATA-type zinc finger domain. 204 229 IPR000679 GO:0006355|GO:0043565
Lapu9g01729 313 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 200 262 - -
Lapu9g01729 313 MobiDBLite consensus disorder prediction 127 202 - -
Lapu9g01729 313 MobiDBLite consensus disorder prediction 55 86 - -
Lapu9g01729 313 Pfam GATA zinc finger 204 237 IPR000679 GO:0006355|GO:0043565
Lapu9g01729 313 PIRSF Txn_fac_GATA_plant 1 293 IPR016679 GO:0003677|GO:0005634|GO:0045893
Lapu9g01729 313 MobiDBLite consensus disorder prediction 127 146 - -
Lapu9g01729 313 ProSiteProfiles GATA-type zinc finger domain profile. 198 234 IPR000679 GO:0006355|GO:0043565
Lapu9g01729 313 MobiDBLite consensus disorder prediction 183 202 - -
Lapu9g01729 313 CDD ZnF_GATA 203 250 IPR000679 GO:0006355|GO:0043565
Lapu9g01729 313 SMART GATA_3 198 248 IPR000679 GO:0006355|GO:0043565
Lapu9g01729 313 Gene3D - 197 248 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01729 Lapu-Chr9 32135253 32136894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01729 30 313 C2C2-Gata Transcription Factor Family AT5G25830 50.151 1.83e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lapu9g01729 GATA 2.8e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01729 - - gmx:100776588 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01729 9 32135253 32136894 Lapu9g01729 9 32135253 32136894 ECH