Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01727 ATGGCCAAAGGATCTTCAAAGTCTTCAAAAACAAAATCCATGACATTTATATGCCTCTTCTTCTTCATGCTCAACTTCCACTTATCCCATGGAGATTCACAAGAGGTTGAGCTTTTATTATCCTTCAAAGCTTCCATCGATGACCCGCTTCACTTTCTCTCCAACTGGGAAACTTCCTCTGCCACTATATGCAAGTGGCATGGCATCACCTGCGACAGCAACGTTAACTCTTCCCACGTTAACGCTGCGGTTCTCTCGGGAAAAAACATGACCGGCGAGGTTTCCTCCTCCATTTTTCAACTTCCATACGTCACAAACCTCGACCTTTCCAATAACCAGTTTGTTGGGGAAATCACTTTTAACTACTCTCTCAATTCTCTGTCTCTACTTCGTTACCTTAACCTCAGCAACAACAACCTCACGGGTTCTTTACCTCAACCCTTGTTTTCCGTGCTTTTCTCAAACCTTGAAACTCTGGATCTCTCCAACAACATGTTTTCCGGGAAGATACCTGACCAAATTGGATTGCTTTCCAGCTTAAGGTATCTTGATCTTGGAGGAAACGTTTTGGTAGGAAAGATTCCGAATTCCATCACCAACATGACCGCTTTGCAATACCTTACGTTGGCTTCAAACCAGTTAGTGGATAAGATACCACAAGAAATTGGCCAAATGAAGAGCTTGAAGTGGATTTACTTGGGCTACAACAACCTTTCAGGAGAGATACCAAGTAGCATTGGACAGTTACTCTCTTTGAATCATCTCGACCTTGTTTACAACAACCTCACAGGACCTATTCCTCAATCTCTCGGACACCTCACCGAGCTCCAATATCTCTTTCTCTATCAAAATAAACTGAGTGGTCCAATTCCCCAATCCATTTTCGAACTGAAAAAGCTCATTTCACTCGATCTAAGTGATAACTCTCTTTCGGGTTTGATTTCTGAGCGTGTGGTTCAGCTCCAGAGGCTGGAGATTCTCCACCTTTTCTCAAACAACTTCACTGGGAAGATTCCAAAGGGTGTGGCATCTTTGCCTCGGCTTCAGGTTCTTCAGCTGTGGTCAAATGGATTAATAGGTGAGATTCCTGAAGAGCTAGGAAAACATAGCAACCTCACTGTGTTGGACCTCTCCACCAACAACCTCGCAGGGAAGATTCCAGATAACATATGCTACTCAGGTAGTCTTTTCAAGCTGATCCTCTTCTCCAACTATTTCGAAGGAGAAATCCCGAAGAGCTTAACCTCTTGCAGAAGCCTTCGCCGAGTGAGACTCCAAAACAACAAGTTCTCGGGGAAATTACCATCGGAGTTAACCACACTGCCTCAGGTATACTTCTTGGATATCTCTGGAAACCAACTTTCTGGAAGGATCGATGACAGAAAATGGGACATGCCGTCCCTTCAAATGCTCAGTTTGGCTAACAACAACTTCTCAGGAGAAATCCCAAGCTCTTTTGGGACACAAATTCTTGAAGACTTGGACTTATCAAACAACCAATTCTCAGGTTCTATTTCGCTGGGTTATAAAAGGCTATCAGAGCTGGTAGAATTGAAGCTCAGCTATAACAAACTCTCTGGTAATATCCCAGGAGAAATTTGCTCGTGCAAGAAGCTTGTGGCCTTAGATTTGAGTCACAACCAGCTCAGTGGTGAAATCCCGATGAAATTCTCCAAGATGCCGGTTCTCGGCCTTCTTGACCTGTCGCAAAACCAATTCTCCGGTGAGATACCACAGGATTTGGGAAGCATCGAGTCTCTCGTTCAGATCAACATTTCACACAACCATTTTCACGGAAGTTTACCTCCTACAGGTGCTTTCCTTGCCGTTAACGCTAGTGCAGTCACCGGCAACAACCTTTGTGACCGTGATGGTGACGCTTCAAGCGGTTTGCCACTGTGCAAAAGCAATAACCAGAACCCAGCTTGGCTCTCCATCATGTTGTGTTTTCTACTAGCATTTGTTGCGTTGGCAGCAGCTTCTTTACTCGTGTTTTGTGTTCGTAAGAGAAAGAGCTTCTTGGAAGTGCGAAAAGTTGAAAACGAAGACGGAACATGGGAAGTGCAGTTTTTTTATTCCAAAGCAGCGAGGTTAATGAAGGTAGATGATGTTTTGTCTGCTGTTAAAGAGGGAACAGTTGTGTCCAAAGGAAGGAACTGGGTTGCTTACGAAGGGAAGTGCATGGAGAATGACATGCAGTTCGTGGTGAAAGAAATCAGTGACTTAAATTCTCTTCCGATGAGTATGTGGGAAGAGACAGTGAAGGTTGGAAAGGTTCGTCACCCCAATATTGTTAATCTTATTGGGACATGTAGGTGTGGGAAGAGAGGGTACTTGGTGTACGAACACGGGGAAGGGAAGAAGCTAAGCGAAATTGTGAACAGTCTTAGTTGGCATTGGCGTTGCAAGATTGCTGTTGGCGTTGCAAAAGCGATTAACTTCTTGCATTCTGACACTTCATCCATGGTTTTGGTAGGAGAGGTTTCAACCGAGACAGTTAGGGTCGACAACAAAGGTGTCCCTCGCCTTAAGGTCACTCCTCCCATAATGACATGTTCGGATGTCAAGAGTTTCACTTCTTCGCCCTACCTTGCCCAAGAGGCAAGAGAGAGGAAAAATGTAACAGAGAAGAGTGAGATATATGGGTTAGGAGTTATGCTGATAGAACTATTGACGGGAAGGAGAGCCATGGACATAGAAGCAGGCAATGGCATGCACAAGACTATTGTGGAGTGGGCCCGTTATTGTTATTCTGATTGTCATCTTGACACGTGGATTGATCCGGTGATGAAAGGTGGAGATGCATTGAGCTATCAGAACGACATAGTTGAGATGATGAATCTGGCACTGCACTGTACCACAACTGATCCCACTGCAAGACCATGCGCAAGAGATGTACTCAAAGCCCTAGAGAGTGTTCACAGAACCACTTTTTGTTGA 2940 0.4463 MAKGSSKSSKTKSMTFICLFFFMLNFHLSHGDSQEVELLLSFKASIDDPLHFLSNWETSSATICKWHGITCDSNVNSSHVNAAVLSGKNMTGEVSSSIFQLPYVTNLDLSNNQFVGEITFNYSLNSLSLLRYLNLSNNNLTGSLPQPLFSVLFSNLETLDLSNNMFSGKIPDQIGLLSSLRYLDLGGNVLVGKIPNSITNMTALQYLTLASNQLVDKIPQEIGQMKSLKWIYLGYNNLSGEIPSSIGQLLSLNHLDLVYNNLTGPIPQSLGHLTELQYLFLYQNKLSGPIPQSIFELKKLISLDLSDNSLSGLISERVVQLQRLEILHLFSNNFTGKIPKGVASLPRLQVLQLWSNGLIGEIPEELGKHSNLTVLDLSTNNLAGKIPDNICYSGSLFKLILFSNYFEGEIPKSLTSCRSLRRVRLQNNKFSGKLPSELTTLPQVYFLDISGNQLSGRIDDRKWDMPSLQMLSLANNNFSGEIPSSFGTQILEDLDLSNNQFSGSISLGYKRLSELVELKLSYNKLSGNIPGEICSCKKLVALDLSHNQLSGEIPMKFSKMPVLGLLDLSQNQFSGEIPQDLGSIESLVQINISHNHFHGSLPPTGAFLAVNASAVTGNNLCDRDGDASSGLPLCKSNNQNPAWLSIMLCFLLAFVALAAASLLVFCVRKRKSFLEVRKVENEDGTWEVQFFYSKAARLMKVDDVLSAVKEGTVVSKGRNWVAYEGKCMENDMQFVVKEISDLNSLPMSMWEETVKVGKVRHPNIVNLIGTCRCGKRGYLVYEHGEGKKLSEIVNSLSWHWRCKIAVGVAKAINFLHSDTSSMVLVGEVSTETVRVDNKGVPRLKVTPPIMTCSDVKSFTSSPYLAQEARERKNVTEKSEIYGLGVMLIELLTGRRAMDIEAGNGMHKTIVEWARYCYSDCHLDTWIDPVMKGGDALSYQNDIVEMMNLALHCTTTDPTARPCARDVLKALESVHRTTFC* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01727 979 Gene3D Ribonuclease Inhibitor 393 489 IPR032675 -
Lapu9g01727 979 Gene3D Ribonuclease Inhibitor 290 392 IPR032675 -
Lapu9g01727 979 Gene3D Ribonuclease Inhibitor 490 625 IPR032675 -
Lapu9g01727 979 Pfam Protein tyrosine and serine/threonine kinase 717 969 IPR001245 GO:0004672|GO:0006468
Lapu9g01727 979 SUPERFAMILY L domain-like 265 602 - -
Lapu9g01727 979 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Lapu9g01727 979 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 152 243 - -
Lapu9g01727 979 FunFam Leucine-rich repeat receptor protein kinase EMS1 244 330 - -
Lapu9g01727 979 SUPERFAMILY Protein kinase-like (PK-like) 702 971 IPR011009 -
Lapu9g01727 979 Gene3D Transferase(Phosphotransferase) domain 1 784 977 - -
Lapu9g01727 979 Gene3D Ribonuclease Inhibitor 32 193 IPR032675 -
Lapu9g01727 979 Gene3D Ribonuclease Inhibitor 194 289 IPR032675 -
Lapu9g01727 979 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 331 630 - -
Lapu9g01727 979 PRINTS Leucine-rich repeat signature 300 313 - -
Lapu9g01727 979 PRINTS Leucine-rich repeat signature 512 525 - -
Lapu9g01727 979 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 396 971 - -
Lapu9g01727 979 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 672 783 - -
Lapu9g01727 979 ProSiteProfiles Leucine-rich repeat profile. 155 177 IPR001611 GO:0005515
Lapu9g01727 979 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 34 151 - -
Lapu9g01727 979 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 784 979 - -
Lapu9g01727 979 Gene3D Phosphorylase Kinase; domain 1 671 783 - -
Lapu9g01727 979 ProSiteProfiles Protein kinase domain profile. 708 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01727 979 SUPERFAMILY L domain-like 32 314 - -
Lapu9g01727 979 Pfam Leucine rich repeat 227 286 IPR001611 GO:0005515
Lapu9g01727 979 Pfam Leucine rich repeat 491 549 IPR001611 GO:0005515
Lapu9g01727 979 Pfam Leucine rich repeat 154 214 IPR001611 GO:0005515
Lapu9g01727 979 SMART LRR_typ_2 560 584 IPR003591 -
Lapu9g01727 979 SMART LRR_typ_2 370 393 IPR003591 -
Lapu9g01727 979 SMART LRR_typ_2 273 297 IPR003591 -
Lapu9g01727 979 SMART LRR_typ_2 127 151 IPR003591 -
Lapu9g01727 979 SMART LRR_typ_2 512 536 IPR003591 -
Lapu9g01727 979 SMART LRR_typ_2 153 177 IPR003591 -
Lapu9g01727 979 SMART LRR_typ_2 201 225 IPR003591 -
Lapu9g01727 979 SMART LRR_typ_2 465 489 IPR003591 -
Lapu9g01727 979 SMART LRR_typ_2 345 369 IPR003591 -
Lapu9g01727 979 Pfam Leucine Rich Repeat 130 147 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01727 Lapu-Chr9 32093755 32097879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01727 19 971 Receptor kinase-like Gene Family AT2G25790 52.233 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Lapu9g01727 PK_Tyr_Ser-Thr 1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01727 - - gmx:100777118 1657.5