Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01713 ATGTCCAAAATACCCCTCTTAGTTCCTTTTCATTTGTGTCTGTTATTCAGTGTCGCTGTACCCTCTCAGGTAATTTCCGAAACGGAACAAACAATCCTACTCACACTCAAACGTGAACTGGGAGACCCACCGTCGCTTCGATCATGGAAACCGTCGCCGTCGGCGCCGTGCGACTGGCCAGAGATTGGCTGCAGTGGTGGCTCTGTGACGAAGCTTCTCCTCCCCAACAAAGGCATCACCACCACCAAGAGCCTCCCTTCCACAATCTGCAAACTCAAACACCTCGTCATGCTTGACCTCTCCAACAACTCCATCGCCGGTGAGTTTCCGACAACCTTGTACGAATGCTCCAATCTCCAGTACCTCGACCTGTCGGACAACTACCTCGCCGGGGAAATCCCCGGCGACGTGGACCGCCTCAAAAACCTCACTTACCTCAAACTCGGCGGCAACTCCTTGTCCGGAGAGATCCCGGCGGCGATCGGGAACCTTCCGGAACTGCAAACGCTGAATATTTTCAAAACCAACTTGAACGGAACCGTCCCCAGGGAAATTGGAAACTTGTCCAACCTCGAATTCTTGGGTTTGGCTTATAATCTCAAACTCGCGCCGTGGGAGATCCCATCGGAGTTTAGAAAATTAAGAAATTTGAGGTTTATGTGGATGACGCAGTGTAACTTGATCGGAGAGATTCCAGAATATTTCGGGGATATTTTCACGAACCTCGAACAGTTGGATTTGGCGAAGAACAGTTTATCAGGGAGCATTCCGAGGAATTTGTTTTCGCTGAGGAAGTTGAGGTTCTTGTACCTATTCAGTAACAGGTTTTCGGGTGTGATTCCTAGTCCTACGATGCAGGGTTTGGAATTAACCGAAGTTGATTTTGCAAAGAATAATTTGACGGGTTCCATACCGCGAGAGTTTGGAAAGTTAAAGAAGTTAAGTTCCTTGCACTTGTACGAGAATCACTTGAGTGGTGAGATTCCCAAAAGTTTAAGCCTGATTCCTAGTCTTGAGTATTTCAGGGTTTTCAGCAATAACTTGAGTGGAACACTGCCTCCAGAACTAGGCCTGCATTCCAAGCTTACAGCGTTTGAGGTTTCTGATAACCAACTCGGTGGTGGGTTGCCGGAACATTTATGTGCGGGTGGTGCCCTTATTGGTGTGGTTGCTTCTTCCAACAATTTTAGTGGGGTTTTGCCTGAGTGGATTGTGAATTGTCCTTCTCTCGCCACGGTTCAGGTTTATAATAACAAGTTTTCAGGTGAGGTTCCTTCAGGTTTGTGGACTATGAATAACCTCTCGTCCTTGATTTTGAGCAACAACTCCTTTTCTGGGTCTCTTCCCAGTAAAGTGTTTTGGAATATGGCGAGGCTTGAGATCGCCAACAACAACTTCTCGGGTGGGATATCTGTTGGGATCTCTTCAGCCAAAAATCTGGTGTTTCTTGATGCGAGAAACAACATGCTTTCGGGTGAAATTCCAAGCGAATTGACTCAACTTTCTCAGCTTAGTGCTCTCATGCTGGATGGTAACCAACTTTCGGGTGCACTTCCATCTGAGATTATTTCGTGGCAATCACTGAACACTTTGACACTATCACGAAACAAACTTTCTGGCCCGATTCCCACAGCTATTACTGCTCTTCCCCGTCTGGCTTACCTGGACTTGTCTCAAAATGACATATCAGGTGAAATCCCTCCTCAGTTTGATAGGTTGAGGTTTGTTTTTCTCAACTTGTCCTCCAACCAGATATCTGGGAAAATCCCTGATGAGTTCAATAACCTCGCATTTGAAAACAGTTTCTTGAACAATCCTCATCTATGTGCTTACAATCCAAACGTCCACCTTGATAACTGCTTGACCAAAACCACGTCGGCGGCACCACAGTCGAGCAATTCGCCTTCAAAATCACTGGCCCTGATTCTAGCTGCCACCGCCGTTGTATTACTGGCCTTAGCCTCCTTGGTTTTCTATACGTTGAAAACGCAATGGGGCAAAAAGCAATGCGGGTATAAAAATAAGGTTGCAACGTGGAGGCTCACTTCATTCCAGAGGCTTGATCTCACTGAAATAAACTTCCTCTCTAGTTTGACAGACAATAACCTGATAGGAAGTGGAGGGTTTGGGAAAGTTTACCGGATTGCTTCAAATCGGCCAGGTGAGTATGTTGCGGTGAAGAGGATCTGGAATCGCGAGGATGTGGATGACAAGTTGGAGAAAGAGTTCCAGGCTGAGGTTGAGATCCTGGGCAATATTCGGCACTCGAATATAGTGAAGCTTTTGTGCTGCTATGCAAGTGAGAACTCCAAACTTTTAGTTTATGAATACATGGAAAATCAGAGCCTGGACAAATGGCTTCATGCAGAGAAGAAAACATCGCCTACTGGGTTGAGTTGGCCAACGAGGTTGAATATTGCCATTGGGGTTGCACAAGGTCTGTGTTACATGCACCATGAATGCTCACCCCCCGTCATCCACCGAGATGTAAAATCTAGCAATATACTGTTGGACTCAGAGTTCAGAGCTAAAATAGCAGATTTTGGGCTCGCCAAGATGTTGGCAAAGCCCGGGGAACTACACACCATGTCTGCTCTAGCAGGCTCTTTTGGCTACATTCCACCAGAATATGCCTATTCAACTAAGATTAACGAGAAGGTTGATGTTTATAGCTTTGGCGTTGTGCTCTTAGAGCTTGTGACGGGAAGGAAGCCTAATATAAGAGGAGACCATGCGTGCAGCCTAGTTGAATGGGCGTGGGAGCATTTTACTGAAGCGAAAAGCCTTACTGATGCATTCGATGAGGATGTCAAAGAACCACGTTATGCAGAAGAGATGGCTAATGTCTTCAAATTGGGCCTCCTTTGCACAAGCTCCTCGCCCTCAACTAGACCTTCCACGAAGGAGATTTTGCAAGTTCTTCGTCGGTGTTGTCATTCAGGTTCTACACGTAGAAGAGTGGGAAATGAGTTTGATATCGCTCCTCTACTTGGCGACACAAGGTACGTTTGTAGTTACAAGCAGAGTAATGCCGCAACCAATAACTCATCTTGGTGA 3057 0.4645 MSKIPLLVPFHLCLLFSVAVPSQVISETEQTILLTLKRELGDPPSLRSWKPSPSAPCDWPEIGCSGGSVTKLLLPNKGITTTKSLPSTICKLKHLVMLDLSNNSIAGEFPTTLYECSNLQYLDLSDNYLAGEIPGDVDRLKNLTYLKLGGNSLSGEIPAAIGNLPELQTLNIFKTNLNGTVPREIGNLSNLEFLGLAYNLKLAPWEIPSEFRKLRNLRFMWMTQCNLIGEIPEYFGDIFTNLEQLDLAKNSLSGSIPRNLFSLRKLRFLYLFSNRFSGVIPSPTMQGLELTEVDFAKNNLTGSIPREFGKLKKLSSLHLYENHLSGEIPKSLSLIPSLEYFRVFSNNLSGTLPPELGLHSKLTAFEVSDNQLGGGLPEHLCAGGALIGVVASSNNFSGVLPEWIVNCPSLATVQVYNNKFSGEVPSGLWTMNNLSSLILSNNSFSGSLPSKVFWNMARLEIANNNFSGGISVGISSAKNLVFLDARNNMLSGEIPSELTQLSQLSALMLDGNQLSGALPSEIISWQSLNTLTLSRNKLSGPIPTAITALPRLAYLDLSQNDISGEIPPQFDRLRFVFLNLSSNQISGKIPDEFNNLAFENSFLNNPHLCAYNPNVHLDNCLTKTTSAAPQSSNSPSKSLALILAATAVVLLALASLVFYTLKTQWGKKQCGYKNKVATWRLTSFQRLDLTEINFLSSLTDNNLIGSGGFGKVYRIASNRPGEYVAVKRIWNREDVDDKLEKEFQAEVEILGNIRHSNIVKLLCCYASENSKLLVYEYMENQSLDKWLHAEKKTSPTGLSWPTRLNIAIGVAQGLCYMHHECSPPVIHRDVKSSNILLDSEFRAKIADFGLAKMLAKPGELHTMSALAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGRKPNIRGDHACSLVEWAWEHFTEAKSLTDAFDEDVKEPRYAEEMANVFKLGLLCTSSSPSTRPSTKEILQVLRRCCHSGSTRRRVGNEFDIAPLLGDTRYVCSYKQSNAATNNSSW* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01713 1018 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Lapu9g01713 1018 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Lapu9g01713 1018 ProSitePatterns Protein kinases ATP-binding region signature. 704 727 IPR017441 GO:0005524
Lapu9g01713 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 283 380 - -
Lapu9g01713 1018 ProSiteProfiles Protein kinase domain profile. 698 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01713 1018 SUPERFAMILY L domain-like 290 598 - -
Lapu9g01713 1018 Gene3D Ribonuclease Inhibitor 340 627 IPR032675 -
Lapu9g01713 1018 SUPERFAMILY L domain-like 32 372 - -
Lapu9g01713 1018 PANTHER RECEPTOR-LIKE PROTEIN 55 392 975 - -
Lapu9g01713 1018 FunFam Kinase family with leucine-rich repeat domain-containing protein 778 990 - -
Lapu9g01713 1018 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Lapu9g01713 1018 FunFam Receptor-like protein kinase HSL1 678 777 - -
Lapu9g01713 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Lapu9g01713 1018 SMART LRR_typ_2 549 572 IPR003591 -
Lapu9g01713 1018 SMART LRR_typ_2 239 263 IPR003591 -
Lapu9g01713 1018 SMART LRR_typ_2 311 335 IPR003591 -
Lapu9g01713 1018 SMART LRR_typ_2 431 455 IPR003591 -
Lapu9g01713 1018 SMART LRR_typ_2 140 164 IPR003591 -
Lapu9g01713 1018 SMART LRR_typ_2 501 525 IPR003591 -
Lapu9g01713 1018 SMART LRR_typ_2 92 116 IPR003591 -
Lapu9g01713 1018 Gene3D Ribonuclease Inhibitor 202 339 IPR032675 -
Lapu9g01713 1018 Gene3D Phosphorylase Kinase; domain 1 679 777 - -
Lapu9g01713 1018 SMART serkin_6 698 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01713 1018 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 182 280 - -
Lapu9g01713 1018 SUPERFAMILY Protein kinase-like (PK-like) 692 974 IPR011009 -
Lapu9g01713 1018 Gene3D Transferase(Phosphotransferase) domain 1 778 991 - -
Lapu9g01713 1018 Gene3D Ribonuclease Inhibitor 25 201 IPR032675 -
Lapu9g01713 1018 FunFam Receptor-like protein kinase HSL1 isoform A 26 179 - -
Lapu9g01713 1018 Pfam Protein kinase domain 700 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01713 1018 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 384 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01713 Lapu-Chr9 31954779 31958334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01713 18 997 Receptor kinase-like Gene Family AT5G25930 52.738 0.0 985
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu9g01713 Pkinase 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01713 - K00924 gmx:100782466 1609.35