Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01710 ATGGCCATCGCAACAGAGACTCAGCCTCAACAACACAAGCTACGTGCTTCGTTTTGCCAGGAATCGGGCTCATCCGATGCGGAGCAGCGGAGATGGACTCTCAATGATTTTGATCTTGGAAAACCCCTCGGGAGGGGAAAATTTGGCCATGTCTACTTGGCCAGAGAGAAGAGTAGTAATCACATTGTTGCTTTGAAAGTACTTTTTAAGAGCCAATTGCAGCAATCCCAAGTTGTGCATCAACTTCGGCGAGAAGTTGAGATACAGAGTCATCTCCGACATCCCCACATCTTGCGCCTCTATGGATACTTTTATGATCAGAAACGAGTGTATTTGATTTTAGAATATGCACCCAAAGGTGAACTTTACAAGGAATTGCAAAAGTGCAAATATTTCAGTGAAAGGCGTGCAGCTACTTATGTTGCATCATTGGCCCGGGCACTAATATATTGCCATGGAAAACATGTAATACACAGGGACATTAAACCAGAGAACCTTCTTGTTGGTGCGCAGGGTGAGTTAAAAATAGCGGACTTTGGGTGGTCAGTGCACACATTCAATCGCAGGCGGACCATGTGTGGTACACTGGATTACCTTCCTCCAGAGATGGTGGAGAGTGTAGAACATGATGCGAGTGTGGATATATGGAGTCTTGGTGTGCTGTGCTACGAGTTTCTGTATGGAGTGCCTCCTTTTGAGGCTAAAGAACATTCAGATACTTATAGGAGGATAGTACATGTGGATCTTAAGTTTCCTCCTAAACCAATTGTGTCTTCTGCTGCAAAGGATCTTATCAGTCAGATGCTGGTCAAGGATTCCTCGCAACGGTTACCACTGCACAAACTCCTTGAACACCCTTGGATTGTTCAGAATGCGGAGCCCTCTGGTATATATAGAAGCTAA 903 0.4507 MAIATETQPQQHKLRASFCQESGSSDAEQRRWTLNDFDLGKPLGRGKFGHVYLAREKSSNHIVALKVLFKSQLQQSQVVHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLVGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVHVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNAEPSGIYRS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01710 300 PIRSF ILK 10 285 - -
Lapu9g01710 300 Gene3D Phosphorylase Kinase; domain 1 25 120 - -
Lapu9g01710 300 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Lapu9g01710 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Lapu9g01710 300 Pfam Protein kinase domain 39 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01710 300 FunFam serine/threonine-protein kinase Aurora-1 121 296 - -
Lapu9g01710 300 ProSiteProfiles Protein kinase domain profile. 37 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01710 300 FunFam Aurora kinase A 29 120 - -
Lapu9g01710 300 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 8 296 IPR030616 GO:0004672
Lapu9g01710 300 Gene3D Transferase(Phosphotransferase) domain 1 121 297 - -
Lapu9g01710 300 SUPERFAMILY Protein kinase-like (PK-like) 24 292 IPR011009 -
Lapu9g01710 300 CDD STKc_Aurora 36 289 - -
Lapu9g01710 300 MobiDBLite consensus disorder prediction 1 22 - -
Lapu9g01710 300 SMART serkin_6 37 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01710 Lapu-Chr9 31931637 31934480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01710 28 294 CBL-interacting serine-threonine protein kinases AT5G10930 35.766 3.05e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Lapu9g01710 Pkinase 6.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01710 K08850 - gmx:100775451 568.926