LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu9g01693	ATGTTCGCCGCCTTTCGATTCCTTCTTCTTCTCTCACTCTTCTCTCTACTCACCAGCGCCCAACTTCACGACCAGCGTCAAATCCTTCTGAAACTAAAATCCTCCCTCAACAATTCAAACTTTTCAAAACTCTTTGACTCCTGGAATGACAACAACTCCGTTTGCAGTTTCCACGGAGTAACTTGCGACACCCTCCATTCCGTCACCGAAATCAACCTCTCCAACCAAACTCTAACTGGGGTTCTGCCCTTCGGCTCTCTCTGCAACCTTCCATCGCTCCAGAAACTTGCGTTCGGCTTCAACAACTTGTACGGCAATGTTTCTGAGGACATTAGAAACTGCGTCAACTTGCGCTACTTGGATTTGGGAAACAACCTTTTCTCTGGTCCCTTCCCCGACATATCTCCTCTTAGTCAGTTGCAGTACTTGTTTTTAAACAAAAGTGGATTTTCGGGCACTTTTCCGTGGCAGTCGCTGTTAAACATGACGGGTCTGCTGCAGTTAAGTGTCGGAGATAACCCTTTCGATCTCACGCCGTTTCCAAAGGAGGTTGTGAGTCTCAAGAAGCTGAATTGGCTCTACCTCTCCAACTGCACCCTCGGAGGGAAACTTCCGGTGGGACTCGGCAACCTCACGGAGCTAACGGAATTGGAATTCTCCGACAATTTCATCACCGGCGAATTTCCCGCGGAGATTGTGAACCTTCGGAAACTCTGGCAGCTTGTGTTTTACAACAATACCTTCACGGGGAAGATACCAACCGGGTTTAGAAACCTGACGGGGCTGGAGTATTTGGACGGGTCCATAAATAGACTCGAAGGGGATCTCTCTGAAGTGAAGTACTTGACCAATCTGATTTCACTGCAATTTTTTGAGAACAATTTGTCGGGGGAGATTCCGATTGAGATAGGCGAATTCAAACGCCTCCAGTCTCTGTCTTTGTACAGGAACAAATTGACAGGTCCTATCCCTCAGAAGATTGGTTCCTGGGCTGACTTTGATTTCATCGACGTGTCGGAGAATTTCCTGTCGGGGACTATTCCGCCGGAGATGTGTAAAAAGGGGAAGATGACCGCACTGCTCGTGCTTCAGAACAAACTCTCCGGCGAGATTCCGGCCACATATGGAGACTGTTTGACTATGAAGCGATTCAGAGTCAGCAACAACTCGCTCTCGGGTACCGTGCCTCCTGCGATTTGGGGATTGCCCAACGCAGAAATTATCGATATTGAGCTGAATCAGTTGGAAGGTGGGGTTGCTCCGGATATCAGAAACGCCAAAACATTAGCTTCAATATTCGCCAGGCGGAACCGGTTGTCCGGTGAAATACCTGAAGAAATCTCAAAAGCAACATCGTTGGTGAGTGTGGACGTGAGCGAGAATCAGATTTCAGGGAACATTCCTGAAGGAATCGGGGAACTTAAACAACTAGGTAGCCTTCATTTACAGAGAAATAGGTTATCAGGTTCGATACCAGAATCTCTCGGTTCCTGTAAATCCCTCAATGACATTGACCTATCGAGGAACTCACTCTCTGGAGAAATCCCCACTTCGTTGGGTTCTTTCCCCGCGCTGAATTCTCTGAATCTTTCAGAGAACAATCTCTCCGGTGAAATCCCGGGGGGTTTAGCGTTCCTCAGGTTAAGCCTCTTTGACCTATCGCACAACCGGTTAACGGGTCCAATTCCACAGGCTCTCACCCTCGAAGCTTACAACGGAAGCCTCTCTGGAAACCCCGGTTTGTGCAGCATGGACGCGATCAACTCCTTCCCGCGTTGCTCTTCTTCCTCTGGCATGTCCAAGGACATGCGCGCTCTCATCATTTGCTTCGCGATAGCGTCTATATTATTGCTTTTTTGTTTGGGCGTTTACCTGCAGCTCAAGAGGAGGAAGGAGGAGGCAGAGAGATTCGGAGAACGTTCGTTGAAGGAAGAATCCTGGGACGTGAAATCGTTCCACGTGTTAAGTTTCTCGGAAGGGGAGATTCTAGATTCCATTAAGCAGGAGAATCTGATAGGGAAAGGAGGTTCGGGGAACGTGTATAGAGTCACGCTTTCCAACGGAAAAGAACTGGCGGTGAAGCATATTTGGAACACCGATGTACCCGCGCGGAGAAAGTCGTGGAGTGGTACTCCCATGCTTGGGAATAAGCATGGTGGGAAGTCAAAGGAGTTCGACGCAGAGGTTCAGTCTTTGAGCTCCATAAGGCACGTGAATGTGGTGAAGCTTTATTGCAGCATAACGAGTGAAGATTCGAGCTTGTTGGTGTACGAGTATTTACCCAATGGAAGCTTGTGGGATCGGCTTCACACGAGTAGGAAGATGGAGCTTGATTGGGAAACGAGGTATGAAATCGCTGTCGGGGCAGCCAAAGGATTGGAGTATTTGCATCACGGGTGCGAACGGCCCGTGATTCATAGAGATGTCAAGTCTAGTAACATCTTGTTGGATGAGTTTTTGAAACCTAGGATTGCGGATTTTGGGCTTGCTAAGGTTGTTCAAGCCAACGTGGGCAATGATTCTTCCACTCGTGTCATTGCCGGAACCCACGGCTACATTGCTCCTGAATACGGGTATACATACAAAGTGAATGAGAAGAGTGATGTGTACAGCTTTGGAGTGGTGTTGATGGAGCTAGTAACTGGAAAAAGGCCAATTGAAGCAGAATTTGGGGAGAATAAAGACATGGTGAGTTGGGTCCATAACAAGGCACGGAGCAAAGAGGGTCTTAGGAGTGCTGTGGATTCGAGGATCCCAGAAATGTACAAAGAGGAAGCTTGCAAGGTTTTGAGAACCGCAGTTCTGTGCACGGGAACTCTTCCAGCTTTAAGACCCACCATGAGAGCTGTGGTTCAAAAACTGGAGGATGCTGAGCCTTGTAAACTGGTTGGGATTGTGATTAGCAAAGACGGCAGTGAAAAGAAAATAGGAGTGAATGATAAGTAA	2946	0.481	MFAAFRFLLLLSLFSLLTSAQLHDQRQILLKLKSSLNNSNFSKLFDSWNDNNSVCSFHGVTCDTLHSVTEINLSNQTLTGVLPFGSLCNLPSLQKLAFGFNNLYGNVSEDIRNCVNLRYLDLGNNLFSGPFPDISPLSQLQYLFLNKSGFSGTFPWQSLLNMTGLLQLSVGDNPFDLTPFPKEVVSLKKLNWLYLSNCTLGGKLPVGLGNLTELTELEFSDNFITGEFPAEIVNLRKLWQLVFYNNTFTGKIPTGFRNLTGLEYLDGSINRLEGDLSEVKYLTNLISLQFFENNLSGEIPIEIGEFKRLQSLSLYRNKLTGPIPQKIGSWADFDFIDVSENFLSGTIPPEMCKKGKMTALLVLQNKLSGEIPATYGDCLTMKRFRVSNNSLSGTVPPAIWGLPNAEIIDIELNQLEGGVAPDIRNAKTLASIFARRNRLSGEIPEEISKATSLVSVDVSENQISGNIPEGIGELKQLGSLHLQRNRLSGSIPESLGSCKSLNDIDLSRNSLSGEIPTSLGSFPALNSLNLSENNLSGEIPGGLAFLRLSLFDLSHNRLTGPIPQALTLEAYNGSLSGNPGLCSMDAINSFPRCSSSSGMSKDMRALIICFAIASILLLFCLGVYLQLKRRKEEAERFGERSLKEESWDVKSFHVLSFSEGEILDSIKQENLIGKGGSGNVYRVTLSNGKELAVKHIWNTDVPARRKSWSGTPMLGNKHGGKSKEFDAEVQSLSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHTSRKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKVVQANVGNDSSTRVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPIEAEFGENKDMVSWVHNKARSKEGLRSAVDSRIPEMYKEEACKVLRTAVLCTGTLPALRPTMRAVVQKLEDAEPCKLVGIVISKDGSEKKIGVNDK*	982

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu9g01693	981	Gene3D	Ribonuclease Inhibitor	134	354	IPR032675	-
	Lapu9g01693	981	FunFam	Receptor-like protein kinase 7	107	353	-	-
	Lapu9g01693	981	FunFam	LRR receptor-like serine/threonine-protein kinase GSO1	354	597	-	-
	Lapu9g01693	981	Pfam	Protein kinase domain	668	952	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu9g01693	981	FunFam	LRR receptor-like serine/threonine-protein kinase RCH1	760	968	-	-
	Lapu9g01693	981	SUPERFAMILY	Protein kinase-like (PK-like)	657	954	IPR011009	-
	Lapu9g01693	981	SUPERFAMILY	L domain-like	23	349	-	-
	Lapu9g01693	981	Gene3D	Transferase(Phosphotransferase) domain 1	760	963	-	-
	Lapu9g01693	981	FunFam	Receptor-like protein kinase HAIKU2	649	759	-	-
	Lapu9g01693	981	Pfam	Leucine rich repeat N-terminal domain	23	63	IPR013210	-
	Lapu9g01693	981	SUPERFAMILY	L domain-like	279	591	-	-
	Lapu9g01693	981	Gene3D	Phosphorylase Kinase; domain 1	649	759	-	-
	Lapu9g01693	981	ProSitePatterns	Protein kinases ATP-binding region signature.	672	694	IPR017441	GO:0005524
	Lapu9g01693	981	Gene3D	Ribonuclease Inhibitor	356	600	IPR032675	-
	Lapu9g01693	981	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	15	954	-	-
	Lapu9g01693	981	ProSiteProfiles	Protein kinase domain profile.	666	961	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu9g01693	981	SMART	serkin_6	666	961	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu9g01693	981	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	804	816	IPR008271	GO:0004672\|GO:0006468
	Lapu9g01693	981	Gene3D	Ribonuclease Inhibitor	23	133	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu9g01693	Lapu-Chr9	31729224	31733704	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu9g01693	1	974	Receptor kinase-like Gene Family	AT1G09970	60.634	0.0	1161

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Lapu9g01693		Pkinase	5.7e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu9g01693	-		-	gmx:100779554	1721.44