Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01684 ATGTCTCCACCATTGCTGGCCATAGGGGAGGAGGAGGGTAAAAGCAATGTCACTTTGTTGGTTTCCTCATCAACCACCATGGAAAGTGTGTGCCTCAAGACCTTAGAATTAAAAGAACGCAACTACATGGGATTGTCTGATTGTTCTTCTGTGGACAGCTCAGTTCCGTCCTTCTCAGAAGAGACTAAAAGTAATCTGAACCTGAAAGCCACTGAGCTCAGGCTTGGGCTTCCGGGATCACAGTCCCCCGAAAGAGATTCCGATCTTTGCTTAAGAAGCTCTACTCAATTTGATGAAAAGCCTTTGTTTCCTTTGCGTCCTTTGACTGATGATCACCATTCTTCAACCAAGACTGCTGTTTTGGGAAACAAGAGAGGATTCTCAGATGCCATGAATGGCTTCTCAGAGGGGAAGTTCCTAGTTGATTCGGAGGCCAATCCGATACTATCTCCCAGGCCCGCTTCTAACATGGGGTTAAATCCTGGTTCTACACTTGAGAAGGCTGGGGCTCAGCAAAACAAAATGAAAGAAGTAGCAACAGCAAAGGTGGGGCTCGATAGGCCTCATTCTGCCAATGAAACTAGACCAAGTATTGATGGTTCTGCAAATAATAATAACAGTGCACCAGCTACCAAGGCTCAGGTTGTGGGGTGGCCCCCTATAAGATCATTCAGAAAGAATTCATTGGCTACTAATTCAAAGAACAATGAAGAAGTTGATGGAAAAGTGGGGGTTGGTGCACTGTTCATCAAAGTCAGTATGGATGGGGCTCCCTATTTAAGGAAAGTAGACTTGAATAATTACACTACGTATCCAGAACTTTCTTCTGCTCTAGAGAAGATGTTCAGCTGTTTTACCATAAGTCAATGTGGATCTCATGGAATTCTGGGCAGGGAAATGCTGAATGAAACCAAGCTGAAGGACCTTCTTCATGGATCAGAATATGTTCTTACATATGAGGACAAAGATGGCGATTGGATGCTTGTGGGTGACGTTCCCTGGGAGATGTTTATCGAAACATGCAAGAGGCTCAGGATCATGAAGAGTTCCGATGCCATTGGTCTAGCTCCCAGAGCTGTTGAAAAAAGTAAGAGCAGGACCTAG 1104 0.4484 MSPPLLAIGEEEGKSNVTLLVSSSTTMESVCLKTLELKERNYMGLSDCSSVDSSVPSFSEETKSNLNLKATELRLGLPGSQSPERDSDLCLRSSTQFDEKPLFPLRPLTDDHHSSTKTAVLGNKRGFSDAMNGFSEGKFLVDSEANPILSPRPASNMGLNPGSTLEKAGAQQNKMKEVATAKVGLDRPHSANETRPSIDGSANNNNSAPATKAQVVGWPPIRSFRKNSLATNSKNNEEVDGKVGVGALFIKVSMDGAPYLRKVDLNNYTTYPELSSALEKMFSCFTISQCGSHGILGREMLNETKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIETCKRLRIMKSSDAIGLAPRAVEKSKSRT* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01684 367 SUPERFAMILY CAD & PB1 domains 247 348 - -
Lapu9g01684 367 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 66 354 IPR003311 GO:0005634|GO:0006355
Lapu9g01684 367 ProSiteProfiles PB1 domain profile. 247 349 IPR000270 GO:0005515
Lapu9g01684 367 FunFam Auxin-responsive protein 242 359 - -
Lapu9g01684 367 Gene3D - 242 361 - -
Lapu9g01684 367 Pfam AUX/IAA family 71 358 IPR033389 -
Lapu9g01684 367 MobiDBLite consensus disorder prediction 194 212 - -
Lapu9g01684 367 MobiDBLite consensus disorder prediction 185 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01684 Lapu-Chr9 31572711 31578259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01684 250 352 B3 DNA Binding Superfamily AT2G46530 34.951 3.05e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lapu9g01684 AUX_IAA 8e-91 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01684 K14484 - gmx:100783314 614.764