Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01682 ATGGAGCACTATGACCAGGATTTCTTGGAGGAATTGATGACTCTAAGAAGAGAAACATGGGACACCAATCCAAGCACAGAAGAAAACCAGTTCTTCTGTAATGGCTGGAGTAGTTTTGACTGTTTTGATCAGAACTCTCTACCTTACCTCCCAAACTCTTCTTCTGGTCAAGAAGTTCCTCACAGCTACGACTACCCCTTCAATGAAATCTATGGCTCTTTACTCGATGAATCCTCACCACAGATTATCGATTCATACTATAGTACCCTTGATACTCCACTCAATACCCTTGGTCATGAAGATTATCCATTGTCCATTATGGAAGAAGAGGACCCCGGTATTCTTGGGGAAGAGCTTAAGAATTTGGAGCTGCAAACCACATGCAAAGCTGAGCCAACCCAATCCTCCGAAATGCCAGTTTTCAACATGGGAACGGGTCTGGAAAGAAAGAATCGGTCAAAGAAGCTTCAGGGGCAACCCTCCAAGAATCTAATGGCGGAGAGGAGAAGAAGAAAGAGATTAAATGACAGGCTCTCAATGCTGAGAGCAATTGTCCCCAAGATAAGTAAGATGGATAGAACATCTATACTTGGAGACACTATTGATTACATGAAAGAACTTCTGGAGAAGATCAACAATCTTCAACAAGAAGTAGAAGTAGATTCTAAAATGGCAGGCATTTTCAAAGATGTAAAGCCAAATGAAATCCTAGTGAGAAATTCACCCAAGTTTGAAGTGGAGAGGAGTGTAGGCACACGGGTGGAAATTTGCTGTGCTGGAAAGCAAGGATTGTTACTATCAACAGTGAACACCCTGGAAGCATTAGGCCTTGAGATTCAACAATGTGTTATCAGCTGTTTCAATGATTTCACGATGCAGGCTTCTTGCTCAGAGGAATTGGAGCAAAGGGCAATGCTGAGTTCTGAAGACATAAAGCAAGCGTTGTATAGAAGTGCAGGATATGGAGGAAGGTGTTTGTGA 981 0.4251 MEHYDQDFLEELMTLRRETWDTNPSTEENQFFCNGWSSFDCFDQNSLPYLPNSSSGQEVPHSYDYPFNEIYGSLLDESSPQIIDSYYSTLDTPLNTLGHEDYPLSIMEEEDPGILGEELKNLELQTTCKAEPTQSSEMPVFNMGTGLERKNRSKKLQGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYMKELLEKINNLQQEVEVDSKMAGIFKDVKPNEILVRNSPKFEVERSVGTRVEICCAGKQGLLLSTVNTLEALGLEIQQCVISCFNDFTMQASCSEELEQRAMLSSEDIKQALYRSAGYGGRCL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01682 326 Coils Coil 197 224 - -
Lapu9g01682 326 Gene3D - 166 239 IPR036638 GO:0046983
Lapu9g01682 326 Pfam Helix-loop-helix DNA-binding domain 164 207 IPR011598 GO:0046983
Lapu9g01682 326 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 37 320 - -
Lapu9g01682 326 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 207 IPR011598 GO:0046983
Lapu9g01682 326 SMART finulus 164 213 IPR011598 GO:0046983
Lapu9g01682 326 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 162 220 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01682 Lapu-Chr9 31549169 31550623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01682 149 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 67.033 4.85e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu9g01682 HLH 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01682 - - gmx:100812578 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01682 9 31549169 31550623 Lapu9g01682 9 31549169 31550623 ECH