Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01669 ATGAAAGGAGAATACGTAGATCAGCAACAACAACATCCTAAGACCGAAACACCACCTCCTATGTTCTCAAAGCTTCAGCCTCAACACCATCCTTTCCCACACCACCCTTTCCAACTCTCCGCCGACGACGACTCCCGCGCCCTCGCCGTCACACCCGCTACCGCGCAGAAGCCTAACTCCTCCGGCGGCGACGGTGCCACCATCGAGGTCGTACGGCGACCCCGGGGCCGTCCTCCCGGCTCCAAAAACAAGCCCAAGCCACCCGTTATCATAACCCGAGACCCCGAACCTGCTATGAGCCCCTACATTTTAGAAGTGGCTGGAGGCAGCGACGTCGTCGAGGCCATCGCGCAGTTCAGTCGCCGCAAGAATATGGGCATCTGTGTCCTCACTGGTTCCGGGACTGTTGCTAGCGTCACGCTCCGTCAACCCTCCACTACGCCCGGCGCCACTGTTACTTTTCAGGGCCGCTTCGATATTCTCTCTGTCTCCGCTACCTTCCTTCCGCAGCAATCTGGCGCATCACCGGTTCCCAACGGCTTCGCCATCTCGCTCTCCGGACCCCAAGGGCAGATCGTCGGGGGAATGGTCGCCGGCGGGTTGATGGCTGCGGGAACGGTGTTCGTGATCGCCGCTTCGTTCAACAACCCCGCGTATCACAGGCTGCCGCCTGAGGATGAGGGTGCCTCCGCCGGCGATGGACATTCGCCGCCACTCTCGGGCGGCGGAGAAAGCGCGCACGGCCAGGCAGAGTCGTGTGGAATGTCCATGTACAGCTGTCACTTGCCTTCTGATGTGATTTGGGCTCCGACGGCCAGACCACCACCGCCACCACCACCACCTTACTAA 849 0.609 MKGEYVDQQQQHPKTETPPPMFSKLQPQHHPFPHHPFQLSADDDSRALAVTPATAQKPNSSGGDGATIEVVRRPRGRPPGSKNKPKPPVIITRDPEPAMSPYILEVAGGSDVVEAIAQFSRRKNMGICVLTGSGTVASVTLRQPSTTPGATVTFQGRFDILSVSATFLPQQSGASPVPNGFAISLSGPQGQIVGGMVAGGLMAAGTVFVIAASFNNPAYHRLPPEDEGASAGDGHSPPLSGGGESAHGQAESCGMSMYSCHLPSDVIWAPTARPPPPPPPPY* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01669 282 MobiDBLite consensus disorder prediction 221 250 - -
Lapu9g01669 282 MobiDBLite consensus disorder prediction 1 95 - -
Lapu9g01669 282 Gene3D - 100 233 - -
Lapu9g01669 282 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 216 IPR005175 -
Lapu9g01669 282 SUPERFAMILY AF0104/ALDC/Ptd012-like 98 229 - -
Lapu9g01669 282 PIRSF ESCAROLA 9 269 IPR014476 GO:0003680
Lapu9g01669 282 ProSiteProfiles PPC domain profile profile. 96 235 IPR005175 -
Lapu9g01669 282 FunFam AT-hook motif nuclear-localized protein 100 233 - -
Lapu9g01669 282 CDD DUF296 101 214 IPR005175 -
Lapu9g01669 282 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 46 254 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01669 Lapu-Chr9 31427273 31428636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01669 1 277 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 57.333 1.71e-99 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01669 - - gmx:100788098 475.707