Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01658 ATGGCACCCAGTTTTGACTGTGTTTCTAGCCTCCTTTGCTCGGAGGACAGCACCGTTTTCGATGAGAGCCATTATGGGGGTACGATGATGGGGGTGGGGGTGGGGGTGGGGGTGTGCGAGGACACATGGCGTCCCCGGAGGCACCGCTTTGATGAATCGGATGAGTTGCCATTGCTGAGTGATGAGTGCTTGGCGATGATGGTGGAAAGAGAGTGTCAACTCTGGCCTGGTGTGCGTTACTTGAATAGGCTTCAGACTGGAAATTTGGACTTTGGTGCCAGAAAAGAGGCCATTGATTGGATTCACAAGGTCCGATCGCATTTTGGTTTCGGCCCTCTCTGTGGATATCTATCTATAAATTACTTGGACCGATTCCTTTCTGCATATGAATTACCAAAGGGAAGAGCTTGGACAATGCAATTGTTGGCTGTGGCGTGTTTATCTCTGGCAGCCAAAGTAGATGAGACAGAAGTTCCAGTGTCTCTTGATTTACAGGTGGGTGAATCAAAGTTTGTATTTGAGGCCAAAACCATCCAGAGAATGGAGCTTCTAGTACTAAGCACATTGAAATGGAGAATGCAAGCAATCACTCCTTTCACCTTCCTTGATTATTTCCTTTGCAAGATCAATGGGGATCAAAGTCCATTAAAGTCTTCAGTGATGCGTTCTATCCAACTAATATCCAGCACTGCAAGAGGAATTGACTTCTTGGAATTCAAACCATCAGAGATTGCAGCAGCAGTGGCCATGAATGTCATGGGGGAAACCCAAACAGTTGACACAGGGAAAGCAATTTCTGTTCTGATTCAACACGTAGAAAAGGAGAGACTATTGAAGTGCATTAAAATGATCCAAGAGTTGTCATCCAACAGTGGCTCTGTCAAGGATTCAAGTGGTTCTGTCACTTGCCTACCCCAAAGCCCAATAGGTGTGTTAGATGCTTTGTGCTTCAGCCACAAAAGTGATGACACAGATGCTGGTTCATGTGCTAATTCTTCACACAGTACTCCTGATGCCAAAAGGAGGAAGTTAAACAAAACCTGTGGAGCAGAGCTATTGTAG 1062 0.4586 MAPSFDCVSSLLCSEDSTVFDESHYGGTMMGVGVGVGVCEDTWRPRRHRFDESDELPLLSDECLAMMVERECQLWPGVRYLNRLQTGNLDFGARKEAIDWIHKVRSHFGFGPLCGYLSINYLDRFLSAYELPKGRAWTMQLLAVACLSLAAKVDETEVPVSLDLQVGESKFVFEAKTIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINGDQSPLKSSVMRSIQLISSTARGIDFLEFKPSEIAAAVAMNVMGETQTVDTGKAISVLIQHVEKERLLKCIKMIQELSSNSGSVKDSSGSVTCLPQSPIGVLDALCFSHKSDDTDAGSCANSSHSTPDAKRRKLNKTCGAELL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01658 353 CDD CYCLIN_AtCycD-like_rpt1 93 191 - -
Lapu9g01658 353 PANTHER CYCLINS 61 289 IPR039361 -
Lapu9g01658 353 SMART Cyclin_C_2 196 307 IPR004367 -
Lapu9g01658 353 FunFam D2/4-type cyclin 77 189 - -
Lapu9g01658 353 SUPERFAMILY Cyclin-like 56 193 IPR036915 -
Lapu9g01658 353 Gene3D - 65 283 - -
Lapu9g01658 353 SUPERFAMILY Cyclin-like 178 287 IPR036915 -
Lapu9g01658 353 SMART cyclin_7 99 187 IPR013763 -
Lapu9g01658 353 CDD CYCLIN_AtCycD-like_rpt2 196 284 - -
Lapu9g01658 353 FunFam D6-type cyclin 190 282 - -
Lapu9g01658 353 Gene3D - 77 194 - -
Lapu9g01658 353 Pfam Cyclin, C-terminal domain 196 294 IPR004367 -
Lapu9g01658 353 Pfam Cyclin, N-terminal domain 63 193 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01658 Lapu-Chr9 31330008 31333357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01658 67 330 Core Cell Cycle Gene Families AT2G22490 48.529 5.27e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01658 K18810 - gmx:547739 582.793