Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01655 ATGGGTTACCTCTCTTGCAATGCCCAATCCGCAATCGCCACCTGCGATCCTCACTTCAAGAAGCATAAAACCCTCGCTGCCAAACCAATCCGCCAGTTTCACTACGCCGAAATCGCCGCCGCGACTTCCGGTTTCTCGGCCGAGAGCTTCCTAGGCCGAGGCAGTCACGGCAGAGTTTACAAAGCCACCCTAGACGCCGGAAAGCTCCTTGCCGCCGTTAAAACGGCGAAACTGGTCTCTGCCTCGAAGAACCACTCCACTAAATGCACCGGCTGCGGCAACTGCACCAGCCCCGCGGAAAACGAGATCGAGATCCTCTCTCAAGTTCCGAGCCCCCGCGTGGTGAACCTCATCGGCTTCAGCACCGACCCAAACGGCAACAAATTAATCGTCGTTGAATACATGCCCAATGGTTCGCTCCACGATCTATTACATTCCGTTAAAAAATCGCCCAGTTGGAACCGGAGGGTCCGGTTCGCGGTTCAGGTTGCGAAAGCGGTTCGCGAATTGCACTCTTCCAACCCTCCCGTTATTCACCGTGACGTTAAGTCTTCCAATGTTTTAATTGACGAGAAATGGAACGCGAGGCTCGGTGACTTTGGCCTTGCGTTAAGGGGACACGTGGAGGACGTTCGCGTCAAGTGCACTCCGCCCGCGGGGACGTTAGGGTACCTCGACCCATGCTATCTTGCGCCGGAGGATCTCAGCGCCAAGAGCGACGTCTTCAGCTTCGGGATCTTGCTGCTGGAGATCATCAGCGGCCGGAACGCCATCGATGTCAATTACAGTCCTCCCTCAGTGGTGGACTGGGCGGTGCCGCTGATCAAGCTCGGCGACTTCGCCGGAATCTGTGACCGCCGGATCGGACCGCCGCCGGATCCCGCCGTGGTGCGGCAGCTCGCGGTGCTGGCTGCCAGATGCGTGAGATCGACGGCGGATAAGAGGCCGTCCATGGCGGAGGTGGTGGAGTGTCTGAATCTGGCTAGGAAGATGATTCATGCGTCGCCCGTGTGGATGTCTCTGCGGCGGCGCGTGGCGCGTATGGAGAGGGCGGTGCCGGTGGTTGCGTGGGAGGAATGTGATGATAATAGTATTAATGATTGTGATAGGAGTGAGAAATTTGTGAGGATGGTGAAAGGTGGGAGTGGGAGCAGGAAGAAGGGGAAGGTATCTAGTGTGTGGGGCGTAGGGTATGGGATTGAGGCCTCCAATAAGAGTAAAGTGACAAGGTCAAAGTCCATTGGTTCTGGTTCGGTCAGAGGGAGTTGGGTTAAAATGCAGCCACACCAAACCGACCACGGGTTTGTGAGAAGGAAGGTGAGGCTAAAAAAGTCAAAGTCTATGGGGGTTTTGCAAAGTTCCGTACTTTCATATCACAGTGAGAATAAGAAGAATAGGAGTCATGATAATAATAGCAATAATAATCATGATGTATTAGTAATGGGTTCTGCAATGGCGAAGTTGGTTGTTACAGATAGGTTTGAAAGGAAAATGGTGGAAAAACCGTTAGTGAATCTGCATGATGAGGGTGGGAGTGTGAAGGAATCTTTTGAATTGGAATAG 1563 0.5361 MGYLSCNAQSAIATCDPHFKKHKTLAAKPIRQFHYAEIAAATSGFSAESFLGRGSHGRVYKATLDAGKLLAAVKTAKLVSASKNHSTKCTGCGNCTSPAENEIEILSQVPSPRVVNLIGFSTDPNGNKLIVVEYMPNGSLHDLLHSVKKSPSWNRRVRFAVQVAKAVRELHSSNPPVIHRDVKSSNVLIDEKWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIKLGDFAGICDRRIGPPPDPAVVRQLAVLAARCVRSTADKRPSMAEVVECLNLARKMIHASPVWMSLRRRVARMERAVPVVAWEECDDNSINDCDRSEKFVRMVKGGSGSRKKGKVSSVWGVGYGIEASNKSKVTRSKSIGSGSVRGSWVKMQPHQTDHGFVRRKVRLKKSKSMGVLQSSVLSYHSENKKNRSHDNNSNNNHDVLVMGSAMAKLVVTDRFERKMVEKPLVNLHDEGGSVKESFELE* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01655 520 FunFam Serine/threonine-protein kinase-like protein 135 339 - -
Lapu9g01655 520 Pfam Protein kinase domain 47 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01655 520 Gene3D Transferase(Phosphotransferase) domain 1 135 337 - -
Lapu9g01655 520 Gene3D Phosphorylase Kinase; domain 1 7 134 - -
Lapu9g01655 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Lapu9g01655 520 SUPERFAMILY Protein kinase-like (PK-like) 27 325 IPR011009 -
Lapu9g01655 520 PANTHER OS01G0253100 PROTEIN 24 326 - -
Lapu9g01655 520 FunFam Serine/threonine-protein kinase-like protein 8 134 - -
Lapu9g01655 520 ProSiteProfiles Protein kinase domain profile. 45 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01655 520 SMART serkin_6 45 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01655 520 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01655 Lapu-Chr9 31268375 31271001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01655 31 336 Receptor kinase-like Gene Family AT3G59420 41.479 1.13e-66 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lapu9g01655 Pkinase 5.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01655 - - gmx:100799382 746.117