Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01646 ATGAACACAAACAGAGCCGAAGCCGAACGCTTACTCGCCATCGGCGAGAAGCTGCTCCAGAGCCGCGACCTAAGCGGCTCCCGCGACTTCGCCATTCTCGCGCAGGAAGCGGAGCCGCTCCTCGAAGGCTCCGACCAGATCCTCGCAATCGTGGAGGTCCTCCTCGCCGCCGAGAAGTCGATCCATAACAACCACCTCGATTGGTACGCCATTCTCCAAGTGGATCGCACATGCCAGGACCTCGATCTCATAAAGAAACAGTACCGGAGACTGGGCCTTCTCCTTCACCCTGACAAGAACTCTTTCTCCCTTGCCGACCACGCCTTCAAGCTTGTCACCGATGCCTGGGCCATTTTATCCGACCCGGTTCAGAAAGCCTTGTACGACCGAGACGTCGCCGGTTCGACCGAACCGGCGAGGTTCTGGACCGCGTGTCCGTACTGTTATTTTCTCTTCGAATACCCTGCGGATTGCGAAGGGTGTTGCCTGAGGTGCCAGAATTGCGAGAGGTCGTTCCATGGGCTTTCGATTCCGTCCCTCCCCCCACTCGTGCCGGGCCAGGAGGCCTATTATTGTAACTGGGGGTGCTTGCCCATGGGCTTTGTGTTTGGAACTTCGTGCTCCAATGAGCCTGGGTCTGCGCTTGGGCCCATGGTTGAGAATGGCCCGAAGACTGTTTCAAATGGTGTTGCTTCAGAATTGGGTTCCCGTTCTGGGCAGAAGCGCGGAAGGCCGCGAAAGTGGGTGTGA 750 0.5787 MNTNRAEAERLLAIGEKLLQSRDLSGSRDFAILAQEAEPLLEGSDQILAIVEVLLAAEKSIHNNHLDWYAILQVDRTCQDLDLIKKQYRRLGLLLHPDKNSFSLADHAFKLVTDAWAILSDPVQKALYDRDVAGSTEPARFWTACPYCYFLFEYPADCEGCCLRCQNCERSFHGLSIPSLPPLVPGQEAYYCNWGCLPMGFVFGTSCSNEPGSALGPMVENGPKTVSNGVASELGSRSGQKRGRPRKWV* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01646 249 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 221 - -
Lapu9g01646 249 PRINTS DnaJ domain signature 104 124 IPR001623 -
Lapu9g01646 249 PRINTS DnaJ domain signature 88 103 IPR001623 -
Lapu9g01646 249 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lapu9g01646 249 Gene3D DnaJ domain 55 142 IPR036869 -
Lapu9g01646 249 MobiDBLite consensus disorder prediction 226 249 - -
Lapu9g01646 249 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Lapu9g01646 249 Pfam DnaJ domain 67 129 IPR001623 -
Lapu9g01646 249 CDD DnaJ 67 121 IPR001623 -
Lapu9g01646 249 SMART dnaj_3 66 124 IPR001623 -
Lapu9g01646 249 SUPERFAMILY Chaperone J-domain 62 131 IPR036869 -
Lapu9g01646 249 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01646 Lapu-Chr9 31186116 31187750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01646 2 204 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 55.556 4.43e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01646 - - gmx:100802055 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01646 9 31186116 31187750 Lapu9g01646 9 31186116 31187750 ECH