Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01643 ATGTTGTGCTCATCGCGCAACCTTGGACTTCATTTCACTTCAATTAGACTGTCTTCCGACTTCAGGATGTACAGTAATCATGGAAGATGTGGTTTTTGTCAGAGGCAGGATTCTTTGGCACTCTTTTCAGGAGTACGTGTGCTGCTTGGGCCTGTAGATTCAAAATCTAATACTTCATTGTGGCGGTGTTCCCTAATGCCAGGTGGAGGGTGTGAAGCCCCACTTGTGAAAGTGGCCGCTGTTTCTTTGTCAAGGTCATATAATGCTATAGCAGGAAAACCAAGTGCGATTCAATTCATCCCCGCACTTGGTATTATTGGCTTTGCTGTTTTTGGTCTCGAGCCAGTTGTGCGTCTGAGCAGGAATCTGTTTCTCCAAGAAAGTACTGATAGAAGTTGGAAGAAAAGTAGTTCACATTATATTTTGACATCTTATTTTCAACCTGTGCTGCTGTGGACTGGAGTGATGCTCATCTGCAGGGATTTAGATCCACTAGTTCTACCATCAGAAACTAGTCAGGCTATGAAGCAACGGCTGCTGAGTTTTGTAAGATCTTTGTCAACCGTGCTTACGATTGCATACTGTTCTTCAAGCTTAATTCAACAAGCACAAAAAATTTGTATGGAGGCAAATGATTCCAGTGATAAAAGAAATATGAGCCTTGATTTTACTGGGAAAGCTGTATATACTGCAATTTGGGTTGCTGCCGTGTCATTGTTCATGGAGTTGCTGGGTATCTCCACGCAGAAGTGGTTGACTGCCGGTGGTTTGGGCACAGTATTGATTTCCCTTGCAGGTCGTGAGATATTTACAAACTTTCTTTCAAGTATAATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTCAGACAAAAATTAAAGGATATGAGGTTACTGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAATTAGAGGTTCTGATTGTGAAGCAGTTCATATTCCTAATCACAATTTGAGTGTAAATGTTGTGAGAAATCTTAGCAAGAAATCTCATTGGCGTATCAAGACTCACCTTGCTATCAGTCACCTGGATGTTAACAAGATTAATAGTATAATAGCTGATATGCGCAAGGTTTTGGCCAAGAATCCTCAAGTAGAGCAGAGAAAATTGCACAGAAGGGTTTTTCTAGAGAACATTGATCCAGAAAATCAGGCTCTTATGATATTAGTATCCTGCTTTGTTAAAACTTCACGTTCTGAAGAGTACCTCCGTGTAAAGGAGGCAATCCTCTTGGATCTTCTCAGAGTTATAAGTCATCATGGAGCTCGGCTAGCGACACCCATCCGCACAGTTCAGAAGATGTGCAGTGATACTGACTTGGATATTGATCCATTTGATGACACCATTTCCACTCGTTCCAGATCAAAGAAAAACCGTCCTTTCCCACTGATAGATTCACCTTATAAAGTTAAGCCTTCAACTCATGCAACTATTACAAATGAGGACAGAGATGGTAAGATGGGTGAAACCATACCATCTGACTTCAAAGTAGACTCTGATGAATTTTCTGTGACATCAAGTTCGGTCCAGAAGACCTCCAAATCCCAAAAGCCCAAAAGGGAAAGAGCAGGAAGTGCTGGAAAGGAACCATCATCCAAAATTTTGTCAACATCCAATGAGTTTGGTTCTGGAGAGACTACTATGCCATCAAAGCTTGATGATGAGAAATATGTTGTTTCGTCGTCCTCATCATCATCTGTTAGTTGTTCTTTAGATGAGAATATTATTCTTGATGCTGCTCTGCTGGGCTCGAAGAGAACTCTCGCAGTTGATGAAGAATTGGTTCATTCTATACCTGCAGAATCACTAGAAGTTGCAGCCCATCAGAATGGGAGCGAACCTCCTATTTGCAAGGATAAGAAGGACGGTGAGATGTCTTCATTGCCTACTACTGAGCAAAAGGATTAA 1944 0.4162 MLCSSRNLGLHFTSIRLSSDFRMYSNHGRCGFCQRQDSLALFSGVRVLLGPVDSKSNTSLWRCSLMPGGGCEAPLVKVAAVSLSRSYNAIAGKPSAIQFIPALGIIGFAVFGLEPVVRLSRNLFLQESTDRSWKKSSSHYILTSYFQPVLLWTGVMLICRDLDPLVLPSETSQAMKQRLLSFVRSLSTVLTIAYCSSSLIQQAQKICMEANDSSDKRNMSLDFTGKAVYTAIWVAAVSLFMELLGISTQKWLTAGGLGTVLISLAGREIFTNFLSSIMIHATRPFVVNERIQTKIKGYEVTGKVEHVGWWSPTIIRGSDCEAVHIPNHNLSVNVVRNLSKKSHWRIKTHLAISHLDVNKINSIIADMRKVLAKNPQVEQRKLHRRVFLENIDPENQALMILVSCFVKTSRSEEYLRVKEAILLDLLRVISHHGARLATPIRTVQKMCSDTDLDIDPFDDTISTRSRSKKNRPFPLIDSPYKVKPSTHATITNEDRDGKMGETIPSDFKVDSDEFSVTSSSVQKTSKSQKPKRERAGSAGKEPSSKILSTSNEFGSGETTMPSKLDDEKYVVSSSSSSSVSCSLDENIILDAALLGSKRTLAVDEELVHSIPAESLEVAAHQNGSEPPICKDKKDGEMSSLPTTEQKD* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01643 647 MobiDBLite consensus disorder prediction 626 647 - -
Lapu9g01643 647 SUPERFAMILY Sm-like ribonucleoproteins 269 339 IPR010920 -
Lapu9g01643 647 MobiDBLite consensus disorder prediction 458 561 - -
Lapu9g01643 647 MobiDBLite consensus disorder prediction 488 508 - -
Lapu9g01643 647 MobiDBLite consensus disorder prediction 542 558 - -
Lapu9g01643 647 Gene3D - 172 283 - -
Lapu9g01643 647 MobiDBLite consensus disorder prediction 511 525 - -
Lapu9g01643 647 Pfam Mechanosensitive ion channel 226 435 IPR006685 GO:0016020|GO:0055085
Lapu9g01643 647 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 29 639 IPR045042 -
Lapu9g01643 647 MobiDBLite consensus disorder prediction 617 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01643 Lapu-Chr9 31150296 31174893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01643 22 605 Mechanosensitive Ion Channel Family AT1G58200 51.741 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01643 K22047 - gmx:100797302 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01643 9 31150296 31174893 Lapu9g01643 9 31150296 31174893 ECH