Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu9g01643 | ATGTTGTGCTCATCGCGCAACCTTGGACTTCATTTCACTTCAATTAGACTGTCTTCCGACTTCAGGATGTACAGTAATCATGGAAGATGTGGTTTTTGTCAGAGGCAGGATTCTTTGGCACTCTTTTCAGGAGTACGTGTGCTGCTTGGGCCTGTAGATTCAAAATCTAATACTTCATTGTGGCGGTGTTCCCTAATGCCAGGTGGAGGGTGTGAAGCCCCACTTGTGAAAGTGGCCGCTGTTTCTTTGTCAAGGTCATATAATGCTATAGCAGGAAAACCAAGTGCGATTCAATTCATCCCCGCACTTGGTATTATTGGCTTTGCTGTTTTTGGTCTCGAGCCAGTTGTGCGTCTGAGCAGGAATCTGTTTCTCCAAGAAAGTACTGATAGAAGTTGGAAGAAAAGTAGTTCACATTATATTTTGACATCTTATTTTCAACCTGTGCTGCTGTGGACTGGAGTGATGCTCATCTGCAGGGATTTAGATCCACTAGTTCTACCATCAGAAACTAGTCAGGCTATGAAGCAACGGCTGCTGAGTTTTGTAAGATCTTTGTCAACCGTGCTTACGATTGCATACTGTTCTTCAAGCTTAATTCAACAAGCACAAAAAATTTGTATGGAGGCAAATGATTCCAGTGATAAAAGAAATATGAGCCTTGATTTTACTGGGAAAGCTGTATATACTGCAATTTGGGTTGCTGCCGTGTCATTGTTCATGGAGTTGCTGGGTATCTCCACGCAGAAGTGGTTGACTGCCGGTGGTTTGGGCACAGTATTGATTTCCCTTGCAGGTCGTGAGATATTTACAAACTTTCTTTCAAGTATAATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTCAGACAAAAATTAAAGGATATGAGGTTACTGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAATTAGAGGTTCTGATTGTGAAGCAGTTCATATTCCTAATCACAATTTGAGTGTAAATGTTGTGAGAAATCTTAGCAAGAAATCTCATTGGCGTATCAAGACTCACCTTGCTATCAGTCACCTGGATGTTAACAAGATTAATAGTATAATAGCTGATATGCGCAAGGTTTTGGCCAAGAATCCTCAAGTAGAGCAGAGAAAATTGCACAGAAGGGTTTTTCTAGAGAACATTGATCCAGAAAATCAGGCTCTTATGATATTAGTATCCTGCTTTGTTAAAACTTCACGTTCTGAAGAGTACCTCCGTGTAAAGGAGGCAATCCTCTTGGATCTTCTCAGAGTTATAAGTCATCATGGAGCTCGGCTAGCGACACCCATCCGCACAGTTCAGAAGATGTGCAGTGATACTGACTTGGATATTGATCCATTTGATGACACCATTTCCACTCGTTCCAGATCAAAGAAAAACCGTCCTTTCCCACTGATAGATTCACCTTATAAAGTTAAGCCTTCAACTCATGCAACTATTACAAATGAGGACAGAGATGGTAAGATGGGTGAAACCATACCATCTGACTTCAAAGTAGACTCTGATGAATTTTCTGTGACATCAAGTTCGGTCCAGAAGACCTCCAAATCCCAAAAGCCCAAAAGGGAAAGAGCAGGAAGTGCTGGAAAGGAACCATCATCCAAAATTTTGTCAACATCCAATGAGTTTGGTTCTGGAGAGACTACTATGCCATCAAAGCTTGATGATGAGAAATATGTTGTTTCGTCGTCCTCATCATCATCTGTTAGTTGTTCTTTAGATGAGAATATTATTCTTGATGCTGCTCTGCTGGGCTCGAAGAGAACTCTCGCAGTTGATGAAGAATTGGTTCATTCTATACCTGCAGAATCACTAGAAGTTGCAGCCCATCAGAATGGGAGCGAACCTCCTATTTGCAAGGATAAGAAGGACGGTGAGATGTCTTCATTGCCTACTACTGAGCAAAAGGATTAA | 1944 | 0.4162 | MLCSSRNLGLHFTSIRLSSDFRMYSNHGRCGFCQRQDSLALFSGVRVLLGPVDSKSNTSLWRCSLMPGGGCEAPLVKVAAVSLSRSYNAIAGKPSAIQFIPALGIIGFAVFGLEPVVRLSRNLFLQESTDRSWKKSSSHYILTSYFQPVLLWTGVMLICRDLDPLVLPSETSQAMKQRLLSFVRSLSTVLTIAYCSSSLIQQAQKICMEANDSSDKRNMSLDFTGKAVYTAIWVAAVSLFMELLGISTQKWLTAGGLGTVLISLAGREIFTNFLSSIMIHATRPFVVNERIQTKIKGYEVTGKVEHVGWWSPTIIRGSDCEAVHIPNHNLSVNVVRNLSKKSHWRIKTHLAISHLDVNKINSIIADMRKVLAKNPQVEQRKLHRRVFLENIDPENQALMILVSCFVKTSRSEEYLRVKEAILLDLLRVISHHGARLATPIRTVQKMCSDTDLDIDPFDDTISTRSRSKKNRPFPLIDSPYKVKPSTHATITNEDRDGKMGETIPSDFKVDSDEFSVTSSSVQKTSKSQKPKRERAGSAGKEPSSKILSTSNEFGSGETTMPSKLDDEKYVVSSSSSSSVSCSLDENIILDAALLGSKRTLAVDEELVHSIPAESLEVAAHQNGSEPPICKDKKDGEMSSLPTTEQKD* | 648 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu9g01643 | 647 | MobiDBLite | consensus disorder prediction | 626 | 647 | - | - | |
Lapu9g01643 | 647 | SUPERFAMILY | Sm-like ribonucleoproteins | 269 | 339 | IPR010920 | - | |
Lapu9g01643 | 647 | MobiDBLite | consensus disorder prediction | 458 | 561 | - | - | |
Lapu9g01643 | 647 | MobiDBLite | consensus disorder prediction | 488 | 508 | - | - | |
Lapu9g01643 | 647 | MobiDBLite | consensus disorder prediction | 542 | 558 | - | - | |
Lapu9g01643 | 647 | Gene3D | - | 172 | 283 | - | - | |
Lapu9g01643 | 647 | MobiDBLite | consensus disorder prediction | 511 | 525 | - | - | |
Lapu9g01643 | 647 | Pfam | Mechanosensitive ion channel | 226 | 435 | IPR006685 | GO:0016020|GO:0055085 | |
Lapu9g01643 | 647 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 29 | 639 | IPR045042 | - | |
Lapu9g01643 | 647 | MobiDBLite | consensus disorder prediction | 617 | 647 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu9g01643 | Lapu-Chr9 | 31150296 | 31174893 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu9g01643 | 22 | 605 | Mechanosensitive Ion Channel Family | AT1G58200 | 51.741 | 0.0 | 623 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu9g01643 | K22047 | - | gmx:100797302 | 1041.57 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lapu9g01643 | 9 | 31150296 | 31174893 | Lapu9g01643 | 9 | 31150296 | 31174893 | ECH |