Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01642 ATGGTCTGCCCAGGTTCAACGCAATTGTCTCATGACGTTAGGCTCAACAGTAATATTGGATTCTGTAGTTTTCATCGTCATAACCGGATGGGGGTTGGTCGATTACATTTGGTCACCTTAAATCTTTCACCGGGTAGCTTGAAGCAAGACTCTTCGGCACTCCATCTTTTAAGTAGACTACATGCCCCAATAAGGCACGTGCCTTCCAAATGTAATGTTTTCATATGTCGATCTGTCTTAATACCAGGTGGAGGGAGTGGAACTCCTCTCATGAAATCTGCTGGTGTTATTTTAACAAGGTCATATGATGCTTTACAAGGAAACCCTGTTTTGCTTCAATTAATCCCAGCGCTTGGCATCATTGCCTTTGCTGTTTGCGGTCTTGAGCCACTCCTTCGACTTAGCAGGGTTTTGTTCCTTCAAAGAACTGACAGCAGTTGGAAGAAAAGTAGTTCGCGATATATTATGACATCTTATTTTCAGCCACTGTTGTTGTGGACTGGGGCAATGCTCATATGCAGGGCATTAGATCCAGTAGTCCTACCATCTAAGTCCAGCCAGGTTGTGAAACAACGGCTTCTGAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTCTCAAGTTTAATTCAACAAGCACAAAAATTCTTTCTGGAGGCAAATGACTCCAGTGGTGCAAGAAATGTGGGCCTTGATTTTGCTGGGAAGGCAGTATATTCTGCTGTTTGGGTTGCTGCCGTGTCGTTGTTCATGGAGCTGTTAGGTTTCTCCACACAGAAGTGGTTAACTGCTGGTGGTTTGGGCACAGTATTGCTCACTCTAGCAGGTCGTGAGATATTTACAAACTTTCTGTCAAGCATAATGATCCATGCAACTCGGCCATTTATTGTGAACGAGTGGATTCAAACAAAAATTGAAGGATACGAGGTTTCTGGCACAGTTGAGCATGTAGGATGGTGGTCACCAACCATTGTTAGAGGGGATGACCGCGAGGCAGTCCATATTCCTAACCACAAGTTTACTGTAAATGTTGTGAGAAATCTAACCCAGAAATCTCATTGGCGTATCAAGAGTTACATTGCTATCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGTCCAAAAATCCTCAAGTAGAGCAGCAAAAATTGCATAGAAGGGTCTTTTTGGAGAATGTTAATCCTGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTGAAAACTTCTCATTTTGAAGAGTACCTCTGTGTTAAGGAGGCAATCCTTTTGGATCTTCTAAGAGTTGTCAGTCATCATCGAGCCAGGCTAGCCACTCCCATCCGCACAGTTCAGAAAATATACAGTGAGTCTGACTCGGAAAATATACCTTTTGGGGACACAATTTTCACTCGATCTAGAGCTGCAAATCGCCCATTCCTACTGATAGAACCACCGTATAAAGTTAATGGTGAAGATAAAGTTAAACCCTCAACCCGTGCAACTCGCACAAATGAGGAAAAAGATTCCAAGATTGATGAAACCATGGCATCTGACACCAAAGGAGATGAGAATTTTGGAGCAACATCTACCTCCTCAACTGATGTAAACAACTCCAGGGATAAATCCAAGTCGTTTTCTGAATCACAGGCCAAAAAGGAAAATGCAGTAGATGAACGAAAGGGAAGTACAGTTCCTTCAAAGCAAGATGAAGAGAAATCTTCTGTCTCTTCGTCATCAGTTAGACCTTCCTTGGAAGAGAACATTCTTCTTGGGGTTGCCTTAGAAGGCTCAAAACGAACACTTCCAATCGAAGAAGAATTGACTCCATCTCCTATGCCCGCGGATTCACAAGAATTTGCTGTCCAACGGAACGGTGGTGGACCTCCTGCTAGCAAGGATAAGAAGGATGATAATAGAGATAAGATAAAACTTCCCAGGATGAAATTGACAATAATAGTTCATTTGCTGATTGACACCTTTTCACTTGGAAGAGTACAAATTTGCGTTTCTAACTATTCGCGATTGTTCCATTACCGAGAAGAGGATTAG 2070 0.4184 MVCPGSTQLSHDVRLNSNIGFCSFHRHNRMGVGRLHLVTLNLSPGSLKQDSSALHLLSRLHAPIRHVPSKCNVFICRSVLIPGGGSGTPLMKSAGVILTRSYDALQGNPVLLQLIPALGIIAFAVCGLEPLLRLSRVLFLQRTDSSWKKSSSRYIMTSYFQPLLLWTGAMLICRALDPVVLPSKSSQVVKQRLLNFVRSLSTVISFAYCFSSLIQQAQKFFLEANDSSGARNVGLDFAGKAVYSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYIAISHLDVNKINNIVADMRKVLSKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSESDSENIPFGDTIFTRSRAANRPFLLIEPPYKVNGEDKVKPSTRATRTNEEKDSKIDETMASDTKGDENFGATSTSSTDVNNSRDKSKSFSESQAKKENAVDERKGSTVPSKQDEEKSSVSSSSVRPSLEENILLGVALEGSKRTLPIEEELTPSPMPADSQEFAVQRNGGGPPASKDKKDDNRDKIKLPRMKLTIIVHLLIDTFSLGRVQICVSNYSRLFHYREED* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01642 689 MobiDBLite consensus disorder prediction 547 574 - -
Lapu9g01642 689 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Lapu9g01642 689 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 645 IPR045042 -
Lapu9g01642 689 Gene3D - 298 351 IPR023408 -
Lapu9g01642 689 MobiDBLite consensus disorder prediction 495 589 - -
Lapu9g01642 689 Coils Coil 685 689 - -
Lapu9g01642 689 Gene3D - 193 297 - -
Lapu9g01642 689 MobiDBLite consensus disorder prediction 495 526 - -
Lapu9g01642 689 MobiDBLite consensus disorder prediction 613 648 - -
Lapu9g01642 689 MobiDBLite consensus disorder prediction 575 589 - -
Lapu9g01642 689 MobiDBLite consensus disorder prediction 528 546 - -
Lapu9g01642 689 Pfam Mechanosensitive ion channel 240 447 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01642 Lapu-Chr9 31149761 31174893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01642 9 643 Mechanosensitive Ion Channel Family AT5G10490 58.841 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01642 K22047 - gmx:100777815 1118.22