Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01634 ATGTCGGAGAAGAAGACCAAAGTGTCTTTTACGGAAAACGATGCTGTCGCGCTGATGCAGAGGTACGACCCAACTACAGTGTTCACCTTACTTCAAGAAGTTGCGCATTACGCTAAGCCGAAGATTGATTGGAGCGAGTTGGTGAAGACAAGCGCCACTGGGATTTCTAATGTTAGGGAATATCAAATGCTGTGGCGGCATTTGGCCTATCGGCATTCTTTACCGGAAAATTTTGAAGTTGGGGCCGAACCTTTGGATGATGATAGTGACGTAGAGTGTGAGCTAGAGGCATTACCTCCTGTAAGTGTGGAATCTGCATCAGAGGCGGCTGCATGTGTGAAGGTAATGATTGCTTCTCGCACACTAAGTGAATCGGCGCCTAGTAGCTCAACTATCGAGGCTCCATTGACTATAAATGTTCCAGCTTGCCATTCATCTAGAACACTTATTGAAAGTTCACAACCCTCTAATTTGATGCAAGGGACAAACATTGTTTTTCCAGTCACTGTTCAGAGACAAACATTGCCAACACACCCTGTACCATCAACAGATGGTATAGAATCTAAGGGATTAGTTGGTGGTAATCTGGCCTCCAAAAGAAAACGTAAAACATGGTCAGAGGAAGAGGACATACAACTACGAGCTGCTGTTCAGAGATGGGGCGAAGGTAATTGGGCAACCATGGCAAAAGGAGACAACTTCCCTATTAAGAGAAGTCCTACACAGTTAGCACAGAGGTGGAGCATTTTACGAAAAAAAGACGGCACTGTCAATTCTGGAACCATTTCAACCAGCACGCAATATACTACCGCCGAACAGCTGGCAACTCGACACTCTTTATCTTTGGCCCTTGATATGCCATTCAAAAAGTTAACTGCTCCGGGATTGTCCGATCCTGTTAAGACATCCACATCAGTTAAAAATCAAGGGCAGATTAGAAATACTGTGGAGAAGGTTGCCAGTAGTTTTGTACCACCTCAACAGCCAACTCAGCAAGCTTCTTTGTTGGGATCTTCTGATTCTCTTGTAAAACCTAAATTACTAGATGAAAAAATAGTCTTGAAGGGAAATATAATTTCAAATCCTGTGCTAAAATCTACCGCAGCTGCTTCTGGAACACGAATTGATTCTCCTTCAAATACTGCATCTCAGTTTAAAATTGCTCCAGTAAAACACACTGTAGACACTAAGCCTACAGTGAGCTCTTTGACAAAACCATCCATTTCTACCAATTTGTCTTCTGACCCAAAGAACAGACCGGTTACTCCTTTGGCTGATAAAGTTCCATTGAAGCAAGATGTTAATTCCACAAAAGAGTGTAGAGTTTCTGATCCCAGCTCCACACCGATAGAAAAGACACAAAAAAATGAACCTCCTAAAGTTACTATTGGAAGCCAGGTCAATAGCAACTTAGAGAAGGGAAGATTAGAAGTAGGTCAAGTGAAGATCATGCCTACTGTTAAAATTATTAGTGGGGATGAAAGTTTGAAAGATAAACCAAATCCAGTTGCAGATGAAAAACAAACAAGTGCTACTAAAGGAAATACAGTGGTGTGTGAAGACCAAGGAAGTGTTAAGAATGCTACTGAGAATAGCAACTTTGACAAGGGAAGCCTAGATTCAGATCAAGACAAGAAGAAAACTTCAATTAATGAAAGTTCAAACAATCAAAACATGAATGACAAAAATGTAAATTTGCCCGTACAAGATGAACGCAGCCAAAGTGCCAAGATGGTAAAAACTGATGAGAATGTTGAGTGA 1761 0.4157 MSEKKTKVSFTENDAVALMQRYDPTTVFTLLQEVAHYAKPKIDWSELVKTSATGISNVREYQMLWRHLAYRHSLPENFEVGAEPLDDDSDVECELEALPPVSVESASEAAACVKVMIASRTLSESAPSSSTIEAPLTINVPACHSSRTLIESSQPSNLMQGTNIVFPVTVQRQTLPTHPVPSTDGIESKGLVGGNLASKRKRKTWSEEEDIQLRAAVQRWGEGNWATMAKGDNFPIKRSPTQLAQRWSILRKKDGTVNSGTISTSTQYTTAEQLATRHSLSLALDMPFKKLTAPGLSDPVKTSTSVKNQGQIRNTVEKVASSFVPPQQPTQQASLLGSSDSLVKPKLLDEKIVLKGNIISNPVLKSTAAASGTRIDSPSNTASQFKIAPVKHTVDTKPTVSSLTKPSISTNLSSDPKNRPVTPLADKVPLKQDVNSTKECRVSDPSSTPIEKTQKNEPPKVTIGSQVNSNLEKGRLEVGQVKIMPTVKIISGDESLKDKPNPVADEKQTSATKGNTVVCEDQGSVKNATENSNFDKGSLDSDQDKKKTSINESSNNQNMNDKNVNLPVQDERSQSAKMVKTDENVE* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01634 586 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 255 IPR017930 -
Lapu9g01634 586 MobiDBLite consensus disorder prediction 439 465 - -
Lapu9g01634 586 Pfam Myb-like DNA-binding domain 202 247 IPR001005 -
Lapu9g01634 586 MobiDBLite consensus disorder prediction 493 586 - -
Lapu9g01634 586 ProSiteProfiles Myb-like domain profile. 197 251 IPR001005 -
Lapu9g01634 586 SMART sant 201 253 IPR001005 -
Lapu9g01634 586 Gene3D - 196 256 - -
Lapu9g01634 586 CDD SANT_TRF 203 252 - -
Lapu9g01634 586 MobiDBLite consensus disorder prediction 397 418 - -
Lapu9g01634 586 SUPERFAMILY Homeodomain-like 200 253 IPR009057 -
Lapu9g01634 586 MobiDBLite consensus disorder prediction 397 465 - -
Lapu9g01634 586 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 575 - -
Lapu9g01634 586 MobiDBLite consensus disorder prediction 550 574 - -
Lapu9g01634 586 MobiDBLite consensus disorder prediction 505 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01634 Lapu-Chr9 31095260 31104467 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu9g01634 Myb_DNA-binding 2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01634 - - gmx:100805773 815.453