Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01619 ATGAGGAAGAAACGGAAAGGAAGCGAAACTGATGCGTCTGCGGATCTGCCTGTTATTTTGGCTCCTAATCTTGGCTCTGCTTCGTCGAATTTGAAGTCCCATTACTCGCTAGAGGATTGTTCTAGGTTGAAAAAGAGGTGTTGTAAGGGGGATGATGCTGACACTGAGCCAGCTACTTCCTTTAAAAGGAGGCTTGCCGGCATTGCCACTGCCCCGCCTTGTGGGACGTCTTCATTGATAACGCCGGGGCGAGGACTCAAGAGGAAGATTGGATGCATTGATGTTGCTACCCAGATGGGCAGGAAGAAGAAGATTGAAGATGATTATGTGTCTGGTGAGACGATTGGGCAAGGCAAGTTTGGGTCTGTTTGGCTGTGTCGGTCGAGGGTCAGTGGAGCGGAATATGCGTGTAAGACCCTGAGGAAGGGGGAGGAGACGGTTCATCGAGAGGTGGAGATAATGCAACACTTGTCCGGACATTCTGGCGTTGTGACACTACAAGCAGTTTATGAGGAAGCTGATTGCTTTCATCTTGTGATGGAATTGTGCTCTGGGGGACGACTCATCGATCGGATGGTCAAGGACGGTCCATATTCGGAACAGCGGGCTGCTAATGTACTCAAGGAAGTGATGTTGGTCATCAACTATTGTCATGACATGGGAGTTGTACATAGAGATATCAAACCCGAGAATATACTGCTCACAGCATCTGGGAAAATAAAGCTTGCGGATTTTGGCTTGGCCATGAGAATTTCAGAAGGTCAGAACTTGACTGGTTTGGCCGGAAGCCCTGCATATGTTGCCCCAGAAGTGTTGTTAGGTAGATACTCTGAGAAGGTGGATATATGGAGTGCTGGAGTACTTCTGCATGCTCTGTTGGTTGGCTGTCTTCCATTTCAAGGAGATTCATTGGAAGCAGTTTTTGAGGCTATTAAGACCGTCAAATTAGATTTCCAAACTGGGATGTGGGAATCAATATCCAAACCTGCACGAGATCTGATTGGGAGAATGCTGACCAGGGATATTTCATCGAGGATATCAGCTGACGAAGTACTTAGGCATCCATGGATATTGTTCTACACGGCACATACATTGACGATGCTGCCAGTCAAAACAAAATTGAAGAACCAATTTGGTGCAACAGGCCAACAGCTTGTTGCTGTTCCTGAACCAGGGTTAGGAGGAAATAGGATAGATAATTACTCTCTTAGCGAGGGTTCATCCTCCGAAAGTTGCAATTCTGATGATCAGGATGAATGTGTGTTGATTGATGTGCTTGCCTCTGCAATTTCGCATGTGAGGATATCTGAACCAAAGAGGAGCAGAGTGTGTGGCCCCACAGGTCCGATAGTTCAACAAGGTTCATCTAACATGAAGCCTAACAACCTCTGTAAAGCATTTTGA 1404 0.4672 MRKKRKGSETDASADLPVILAPNLGSASSNLKSHYSLEDCSRLKKRCCKGDDADTEPATSFKRRLAGIATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYVSGETIGQGKFGSVWLCRSRVSGAEYACKTLRKGEETVHREVEIMQHLSGHSGVVTLQAVYEEADCFHLVMELCSGGRLIDRMVKDGPYSEQRAANVLKEVMLVINYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLLGRYSEKVDIWSAGVLLHALLVGCLPFQGDSLEAVFEAIKTVKLDFQTGMWESISKPARDLIGRMLTRDISSRISADEVLRHPWILFYTAHTLTMLPVKTKLKNQFGATGQQLVAVPEPGLGGNRIDNYSLSEGSSSESCNSDDQDECVLIDVLASAISHVRISEPKRSRVCGPTGPIVQQGSSNMKPNNLCKAF* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01619 467 FunFam Serine/threonine-protein kinase PEPKR2 100 422 - -
Lapu9g01619 467 SMART serkin_6 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01619 467 Gene3D Transferase(Phosphotransferase) domain 1 100 387 - -
Lapu9g01619 467 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Lapu9g01619 467 PANTHER SERINE/THREONINE-PROTEIN KINASE 96 371 - -
Lapu9g01619 467 Pfam Protein kinase domain 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01619 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Lapu9g01619 467 ProSiteProfiles Protein kinase domain profile. 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01619 467 CDD STKc_CAMK 108 356 - -
Lapu9g01619 467 SUPERFAMILY Protein kinase-like (PK-like) 100 370 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01619 Lapu-Chr9 30888480 30892353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01619 109 357 EF-hand Containing Proteins AT1G50700 45.560 1.15e-78 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lapu9g01619 Pkinase 4.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01619 - - gmx:100812729 872.078