Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01613 ATGGCACTAGAGGCTGTGGTATTTCCGCAAGATCCGTTTCCGTATGCTTGCAAGGATTATTTTTACTCCTTAGTAGGAGCAGCACCCGACTTGGGTTTTCAAGCGGCAGAAGAAGAGAAACTCCTCCTAGGAATCATCAACAACAACATAGAACACAATCTATATGCAAACTGGGATTCTTCTTCTACCTCGGTCTTGCAAAATGTGAAGGAACAATGGGATTCTCACTCCTCCCCTGAAGCCTGCACCGTGGATCAATCCATGATTCCACCAGCTTGCTCTTCGGCGGAAGCCAGCGCGACAACGACGAGTCGGCGCAAACGACGTCGTACGAAGAGTGCGAAGAACAAAGAGGAAATCGAAAACCAGAGGATGACCCACATTGCAGTTGAAAGGAACCGCAGAAAGCAGATGAACGAGTACTTAGGCGTACTCCGATCCTTGATGCCTTCTTCTTATGTTCAGAGGGGTGACCAGGCGTCTATTATTGGAGGGGCGATTAACTTTGTGAAGGAGTTGGAGCAGGTTTTGCAGTCAATGGAGGGTGAAAAGAGAAGGAAGCAGGGTGAAGAGAATGTTGGGTTGAATGGGTGGACAACGCCCTTTGCTGAGTTCTTCACGTTTCCCCAATACACGACACGTGGCACGCAGAAGCAGGAACAGAAACAGTGGGCCGTAGCAGACATTGAGGTCACCATGGTGGATAGCCATGCCAATCTCAAGATTCTCTCAAAGAAACAACCTTCCCATCTCATGAAGATCGTTGTTGGGCTTCATAGTCTCAGACTCACCGTTCTCCACCTCAATGTTACCACTCTCCACCACATGGTCCTTTACTCAGTCAGCGTTAAGGTGGAGGAGGGGTGTGAGCTGAACACGGTGGATGAAATTGCGGCTGCAGTGAATCAACTATTAGGCACAATCCAACAAGTTACATTCAACTGA 945 0.4857 MALEAVVFPQDPFPYACKDYFYSLVGAAPDLGFQAAEEEKLLLGIINNNIEHNLYANWDSSSTSVLQNVKEQWDSHSSPEACTVDQSMIPPACSSAEASATTTSRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLGVLRSLMPSSYVQRGDQASIIGGAINFVKELEQVLQSMEGEKRRKQGEENVGLNGWTTPFAEFFTFPQYTTRGTQKQEQKQWAVADIEVTMVDSHANLKILSKKQPSHLMKIVVGLHSLRLTVLHLNVTTLHHMVLYSVSVKVEEGCELNTVDEIAAAVNQLLGTIQQVTFN* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01613 314 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 122 173 IPR011598 GO:0046983
Lapu9g01613 314 MobiDBLite consensus disorder prediction 93 119 - -
Lapu9g01613 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 189 IPR036638 GO:0046983
Lapu9g01613 314 Coils Coil 170 190 - -
Lapu9g01613 314 FunFam Basic helix-loop-helix transcription factor 113 188 - -
Lapu9g01613 314 CDD bHLH_AtFAMA_like 125 192 - -
Lapu9g01613 314 PANTHER MAX DIMERIZATION, MAD 72 309 - -
Lapu9g01613 314 SMART finulus 128 179 IPR011598 GO:0046983
Lapu9g01613 314 Gene3D - 101 190 IPR036638 GO:0046983
Lapu9g01613 314 Pfam Helix-loop-helix DNA-binding domain 123 174 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01613 Lapu-Chr9 30808633 30809972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01613 1 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 50.327 1.64e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu9g01613 HLH 1.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01613 - - gmx:100789380 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01613 9 30808633 30809972 Lapu9g01613 9 30808633 30809972 ECH