Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01602 ATGGCGGCTGCTCCCACGCCTCGCGAAGAGAACGTGTACATGGCGAAGCTCGCCGAGCAGGCCGAGCGCTATGAAGAGATGGTGGAGTTCATGGAGAAGGTATCCGCTGCCGCCGACAACGAGGAACTCACCGTCGAGGAGAGGAACCTCCTCTCCGTCGCCTACAAGAACGTCATCGGAGCGCGCCGTGCCTCGTGGCGCATCATCTCCTCGATCGAGCAGAAGGAGGAGAGCCGCGGCAACGAGGATCACGTCGCCGTCATCCGCGACTACCGATCCAAGATCGAGTCCGAGCTTTCCAACATCTGCGACGGTATCCTCAAGCTCCTCGACTCTCGCCTCATTCCCTCCGCTTCCTCCGGCGATTCCAAGGTCTTCTACCTCAAGATGAAGGGCGATTACCACAGGTACCTCGCCGAGTTCAAGACCGGCGCAGAGCGCAAGGAGGCTGCCGAGAGCACTCTTGCTGCGTACAAATCCGCTCAGGACATTGCAAATGCCGAACTGCCTCCAACTCATCCCATTAGGCTCGGCCTTGCTCTGAACTTCTCTGTATTTTACTATGAAATCCTTAACTCTCCTGATCGTGCCTGCAACCTCGCAAAGCAGGCTTTTGATGAAGCCATTGCTGAATTGGATACACTGGGAGAGGAGTCATACAAGGACAGCACTTTGATCATGCAACTGCTTCGTGATAACCTCACCCTTTGGACCTCTGACATGATGACGGAGCAGATGAAATTAAAGAAGCAGCACCAAAACAGGATGATCAGTAAAGATGTTTTACTGTTAATTAGAATTGAACTTCTCCTCTATATCTTTTTGAAGGGAGGTGTTTGTTGCTAA 846 0.5307 MAAAPTPREENVYMAKLAEQAERYEEMVEFMEKVSAAADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLAAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMMTEQMKLKKQHQNRMISKDVLLLIRIELLLYIFLKGGVCC* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01602 281 Coils Coil 14 41 - -
Lapu9g01602 281 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Lapu9g01602 281 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Lapu9g01602 281 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Lapu9g01602 281 Gene3D - 2 252 IPR036815 -
Lapu9g01602 281 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Lapu9g01602 281 Pfam 14-3-3 protein 14 238 IPR023410 -
Lapu9g01602 281 SMART 1433_4 8 251 IPR023410 -
Lapu9g01602 281 PIRSF 14-3-3 2 251 IPR000308 -
Lapu9g01602 281 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Lapu9g01602 281 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Lapu9g01602 281 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Lapu9g01602 281 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Lapu9g01602 281 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Lapu9g01602 281 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Lapu9g01602 281 FunFam 14-3-3 protein epsilon 4 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01602 Lapu-Chr9 30675711 30679296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01602 6 241 14-3-3 family AT1G78300 92.373 3.55e-162 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01602 K06630 - gmx:100529128 466.077