Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01591 ATGTCACCTGTACTGGCAGGACTATTCAATTTCTGTGTGTTGATTGCTTTACAGCTTGTAGCAGCACGTTCTTCATCCAGCACTGGTAAGGGGAAAAATCATGAAGGCTCAATAAAGTATGGTTTCAGCCTTGTAAAAGGGAAAGCTAATCACCCAATGGAGGATTATCATGTTGCCAAGTTTGCACAGATAAAAGATAATGAATTGGGTTTATTTGCTATCTATGATGGTCACTTGGGTGACCGTGTGCCAGCCTACTTACAAAAACATTTGTTTACCAACATTCTGCGGGAGGAGGAATTTTGGGAAGACCCCACTCTTTCTATCTCAAAAGCATACGAGAGCACAGATCAGGAAATTCTATCCCACAGTTCTGATCTTGGGCGTGGTGGATCAACAGCCGTAACTGCTATATTGATCAATGGGCGAAGGTTATGGATAGCTAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGTCAAGCTGTACAAATGACTACAGACCACGAGCCAAACATGGAACGAGGCAGCATTGAGAATAGAGGTGGATTTGTCTCTAATTTGCCAGGTGATGTGCCTAGAGTAAATGGACAACTTGCTGTTTCTCGTGCATTTGGAGACAAGAGTCTCAAGTTACATTTGCGATCAGACCCTGATGTACAGAATACTGACATAGATGTTGATACTGAGATTCTAATCATTGCAAGTGATGGACTTTGGAAGGTAATGACTAATCAAGATGCAGTGGATATTGCTAGAAGATCCAAAGACCCGCAGAAAGCAGCTAAGCAACTTACTGCCGAAGCATTAAAAAGAGATAGTAAAGATGATATATCTTGTGTTGTGGTTAAATTCAGGTGA 864 0.4167 MSPVLAGLFNFCVLIALQLVAARSSSSTGKGKNHEGSIKYGFSLVKGKANHPMEDYHVAKFAQIKDNELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWEDPTLSISKAYESTDQEILSHSSDLGRGGSTAVTAILINGRRLWIANVGDSRAVLSRKGQAVQMTTDHEPNMERGSIENRGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKLHLRSDPDVQNTDIDVDTEILIIASDGLWKVMTNQDAVDIARRSKDPQKAAKQLTAEALKRDSKDDISCVVVKFR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01591 287 PANTHER PROTEIN PHOSPHATASE 34 286 IPR015655 GO:0004722|GO:0006470
Lapu9g01591 287 Pfam Protein phosphatase 2C 48 279 IPR001932 -
Lapu9g01591 287 CDD PP2Cc 38 286 IPR001932 -
Lapu9g01591 287 Gene3D - 34 287 IPR036457 -
Lapu9g01591 287 FunFam Probable protein phosphatase 2C 39 30 287 - -
Lapu9g01591 287 SMART PP2C_SIG_2 50 286 IPR001932 -
Lapu9g01591 287 SUPERFAMILY PP2C-like 37 286 IPR036457 -
Lapu9g01591 287 SMART PP2C_4 35 284 IPR001932 -
Lapu9g01591 287 ProSiteProfiles PPM-type phosphatase domain profile. 39 286 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01591 Lapu-Chr9 30545088 30548823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01591 12 287 PP2C-type Phosphatase Gene Family AT1G22280 73.050 8.09e-149 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01591 K17506 - gmx:100797292 521.161