Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01574 ATGGCTGTGCTTAGCGGGTTTTGGGGCCTGCCCCATAAGAATCTTGTGAAAAGGTTGGAAGGAGCTAAAGTAAGCGCTTGGATTGATTCAATGAGAGCCTCTTCCCCAACTCGTGCCAAATCAGAAAGCCACCAAGAAAAAAGATCTTGGATCCTTTATCACCCTTCAGCTCTGAATACGTTTGAGCAAATAACATATAATTCCAAAGGCAAGCAGATTGTAGTTTTTCTTGACTACGATGGAACTCTCTCCCCTATCGTTGCAGATCCGGATAAAGCTTTCATGAGTACAAAGATGAGAGCGACGCTTAAGGGAATCGCAAGACATTTTCCCACAGCAATCGTGACCGGGAGGTGCAGAGACAAGGTCTATAACTTTGTAAAACTGGCAGAACTTTACTATGCCGGAAGCCATGGCATGGACATCAAGGGGCCAACAAAAAGGCGAAGTCCAAAGCAAGGTAACAATAAAGCTGTACTGTTCCAACCCGCGAGTCAATTCCTGCCCATGATTGATGAGGTGTACAAGATCTTGTTAGAAAAAACAAAGTCTGTCCCAGGGGCTAAGGTTGAGAACAATAAGTTTTGCTTGTCCGTTCACTTTCGTTGTGTTGACGAAAAGAGTTGGGCATCCTTGGCGGAGAAAGTCAGATTGGTGCTCAATGAGTACCCTCAACTTAAGCTAACCCAAGGGAGGAAAGTGCTTGAGATTCGTCCAACCATCAAATGGGACAAGGGCAAGGCTCTAGAGTTTTTGTTAGAATCATTAGGATACGAGAATTCGAATGATGTATTTCCAATCTATATTGGTGATGATCGAACTGATGAAGATGCTTTTAAGGTTTTGCGCAGTAGGGATCAAGGGATTGGGATACTTGTTTCTAGAGTTGCAAAAGAAACAGATGCTTCCTATACCTTGCAAGATCCATCAGAGGTTGAGCAATTCTTGCGGCGATTGGTGGAGTGGAAAAGATCGAGTAGGGTGAAGTTTATAGAGTTGTAG 1002 0.4391 MAVLSGFWGLPHKNLVKRLEGAKVSAWIDSMRASSPTRAKSESHQEKRSWILYHPSALNTFEQITYNSKGKQIVVFLDYDGTLSPIVADPDKAFMSTKMRATLKGIARHFPTAIVTGRCRDKVYNFVKLAELYYAGSHGMDIKGPTKRRSPKQGNNKAVLFQPASQFLPMIDEVYKILLEKTKSVPGAKVENNKFCLSVHFRCVDEKSWASLAEKVRLVLNEYPQLKLTQGRKVLEIRPTIKWDKGKALEFLLESLGYENSNDVFPIYIGDDRTDEDAFKVLRSRDQGIGILVSRVAKETDASYTLQDPSEVEQFLRRLVEWKRSSRVKFIEL* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01574 333 NCBIfam HAD-IIB family hydrolase 75 283 IPR006379 -
Lapu9g01574 333 FunFam Trehalose 6-phosphate phosphatase 170 329 - -
Lapu9g01574 333 CDD HAD_TPP 74 312 - -
Lapu9g01574 333 FunFam Trehalose 6-phosphate phosphatase 73 160 - -
Lapu9g01574 333 Gene3D - 190 330 IPR023214 -
Lapu9g01574 333 Gene3D - 73 164 IPR023214 -
Lapu9g01574 333 NCBIfam trehalose-phosphatase 71 320 IPR003337 GO:0003824|GO:0005992
Lapu9g01574 333 Pfam Trehalose-phosphatase 76 310 IPR003337 GO:0003824|GO:0005992
Lapu9g01574 333 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 19 327 IPR044651 GO:0004805|GO:0005992
Lapu9g01574 333 SUPERFAMILY HAD-like 74 323 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01574 Lapu-Chr9 30314636 30317347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01574 69 319 Trehalose Biosynthesis Gene Families AT1G70290 26.766 2.65e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01574 K01087 - gmx:100788641 610.527