Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01561 ATGACTTCAATGGGTCCTCCTGCTGATCAAAATCTTGAAACTAAAGAGATCGATCTGAGAAGTATGTCATCCTCTTCGCATGGTCAGGCACCACAAGTCTACAAAGTGCCAATTCCTCCAAGACAGAACCTCTTCAAGGAATTCCAAGCCACCATAAAAGAAACATTCTTTGCAGATGATCCTCTAAGACCCTTCAAAGATCAACCCAAATCAAAGAAGTTCATCCTCGGTGTTGAGGCCATATTCCCAATACTTAAGTGGGGAAGAAGTTACAACCTCAAAAAATTTAGAGGGGATTTAATATCTGGTCTCACTATTGCGAGTCTTTGCATTCCTCAGGATATTGGCTACGCCAGGCTTGCACATTTGGCTCCGCAGTATGGACTGTACTCAAGTTTTGTTCCACCATTGATCTATGCTGTCATGGGTAGCTCCCGTGATATTGCTATAGGACCTGTAGCAGTGGTTTCTCTCTTGTTGGGGACCTTACTTAGTAATGAGATGGATCCTAATAAAAATGCGGCAGAATATCAGCGACTTGCTTTTACAGCCACTTTTTTTGCCGGGATTACTCAAGCAACGCTTGGTGTTCTTAGGTTAGGATTCTTGATTGACTTCCTATCCCATGCTGCTATTGTCGGTTTTATGGGGGGTGCTGCTATCACAATTGCCCTTCAACAGCTCAAGGGTTTCCTTGGCATTAAAACTAAAAAGTTTACAACGAAAACTGATATTATCTCTGTGCTGCATTCAATATTCAATACAGCCCATCATGGATGGAACTGGCAAACTATAGTCATCGGAGCTAGCTTTTTGAGTTTTCTTCTGGTCGCCAAATACATTGGAAAGAAAAACAGGAGATTATTCTGGGTGCCAGCAATTGCTCCGTTGATATCCGTTATTTTGTCAACTTTTTTTGTATTCATAACCCGTGCAGATAAGCAAGGAGTAGAAATTGTGAGAAAAATAGAGAACGGAATCAATCCATCATCTGTTAAAGATCTTTATTTAACCGGAGAAAACCTTGGAAAAGGTTTTAAAATTGGCATCGTTGCTGGCCTGATAGCATTGACTGAAGCCTCAGCAATTGGAAGAACATTTGCATCTATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTTGCACTAGGAACAATGAATATTGTTGGTTCGATGACTTCCTGTTATGTGGCAACTGGTTCTTTCTCTCGGTCCGCTGTGAATTTCATGGCTGGCTGCCAAACTGCAGTCTCTAATATTGTGATGTCAGTAGTTGTGTTCTTAACTCTGGAATTCATCACTCCGCTTTTTAAGTACACTCCAAATGCCATTCTTTCCGCCATCATCATTTCTGCTGTCATCAACCTTGTAGACTATGAGGCAGCAATTTTGATTTGGAAGATAGATAAATTTGACTTTGTAGCTTGCATGGGTGCATTCTTTGGGGTTGTTTTTGCCTCGGTTGAGATAGGACTTCTAATTGCTGTCTCTATATCCTTTGCAAAGATCCTACTACAAGTCACAAGGCCCCGAACTGCAATTCTGGGGAAGATCCCTAGGACTACTGTCTATAGAAACATCCAACAATATCCAGAAGCTAGTAAGGTTCCAGGTGTACTGATTGTAAGAGTTGATTCTGCAATATACTTTTCCAACTCCAATTACGTTAAAGAAAGGACATTAAGATGGCTGATGGATGAAGAAGAAAAAGTGAAAGGAGACTACCGCACAAAAATCCAGTTTTTGATAATTGAAATGTCACCCGTTACTGATATCGACACAAGTGGCATCCAAGCCTTTGAAGAGTTACACAGAAGTCTTAAAAAGAGAGGTGTTGAGCTTGTTCTTGCAAATCCTGGTCCAGTAGTGACAGACAAGCTTTACGCATCCAATTTTGCAAACGCAATAGGCGAGGACAAGATCTTCCTCACTGTTGCAGAGGCTGTTGCATATTGTTCTCCAAAGGTGGTTGAGGAGCCTTGA 1986 0.4134 MTSMGPPADQNLETKEIDLRSMSSSSHGQAPQVYKVPIPPRQNLFKEFQATIKETFFADDPLRPFKDQPKSKKFILGVEAIFPILKWGRSYNLKKFRGDLISGLTIASLCIPQDIGYARLAHLAPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLSNEMDPNKNAAEYQRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKTKKFTTKTDIISVLHSIFNTAHHGWNWQTIVIGASFLSFLLVAKYIGKKNRRLFWVPAIAPLISVILSTFFVFITRADKQGVEIVRKIENGINPSSVKDLYLTGENLGKGFKIGIVAGLIALTEASAIGRTFASMKDYQLDGNKEMVALGTMNIVGSMTSCYVATGSFSRSAVNFMAGCQTAVSNIVMSVVVFLTLEFITPLFKYTPNAILSAIIISAVINLVDYEAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEASKVPGVLIVRVDSAIYFSNSNYVKERTLRWLMDEEEKVKGDYRTKIQFLIIEMSPVTDIDTSGIQAFEELHRSLKKRGVELVLANPGPVVTDKLYASNFANAIGEDKIFLTVAEAVAYCSPKVVEEP* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01561 661 FunFam Sulfate transporter 31 510 656 - -
Lapu9g01561 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Lapu9g01561 661 Pfam Sulfate permease family 96 478 IPR011547 GO:0016020
Lapu9g01561 661 PANTHER SULFATE TRANSPORTER 42 654 IPR001902 GO:0016020|GO:0055085
Lapu9g01561 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Lapu9g01561 661 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Lapu9g01561 661 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
Lapu9g01561 661 Pfam STAS domain 531 649 IPR002645 -
Lapu9g01561 661 Gene3D STAS domain 510 657 IPR036513 -
Lapu9g01561 661 NCBIfam sulfate permease 83 649 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01561 Lapu-Chr9 30152105 30157365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01561 1 660 Inorganic Solute Cotransporters AT1G22150 72.879 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01561 K17470 - gmx:100804208 1158.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01561 9 30152105 30157365 Lapu9g01561 9 30152105 30157365 ECH