Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01559 ATGTCCTCCTCTTTCTCTTCGTCAAATTCGCCGTGCGCCGCGTGCAAGATTCAGCGCCGGAAGTGCACGCAGGAGTGCGTCTTCGCGCCTTATTTTCCGCCGGACAACCCGCAGCGCTTTGCGTACGTGCACAAGGTGTTCGGGGCCAGCAACGTCGCCAAGCTTCTCAACGAACTAAACGCGGCGCAGCGCGAGGACGCCGTCAAGTCCCTTGCCTACGAGGCCGAGGCGCGTCTGCGGGACCCCGTCTACGGCTGCGTCGGTCTCATCTCCATCCTCCAGCACCGCCTCAAGCAGTTGCAGACAGAACTCCACCACGCTAAGAAGGAACTCGCCTCTTACATCGGACCCCACGCCATGCTCCCTCCTCCTCCGCCCCCTCCTCCGCAACCGCGCACCTTCTCTCTCTTTCCCTTCAAAACGGCACCTCCTCCTCCTCATCACGATCTTTTCTCCTTCACCGACGACGGTGCTTCCGCTTCTCACTCTTCCCACGCCGCCTTCAACCATCTGGCTGTTCTCTCGCCTTCCCTAGCCGCCGATCACGCCTTCCCTCACGCACCCACCCTCCCTCTCGCTCTTCCGCATCACCAACACCTAATGCTCTCCCCTATGCACTCCAAACCCCAAACCGACCCAGCTTAA 645 0.6093 MSSSFSSSNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQREDAVKSLAYEAEARLRDPVYGCVGLISILQHRLKQLQTELHHAKKELASYIGPHAMLPPPPPPPPQPRTFSLFPFKTAPPPPHHDLFSFTDDGASASHSSHAAFNHLAVLSPSLAADHAFPHAPTLPLALPHHQHLMLSPMHSKPQTDPA* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01559 214 Coils Coil 90 110 - -
Lapu9g01559 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 145 - -
Lapu9g01559 214 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lapu9g01559 214 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01559 Lapu-Chr9 30048933 30050910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01559 5 132 AS2 family AT5G66870 76.515 1.14e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu9g01559 LOB 2.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01559 - - gmx:100819170 307.76