Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01549 ATGAGCAATCTGAGAACCCTGTGTAGACCTCAGACGGTGTTCTCTTTCATTAGTTGCAGACACCAATTTCGATCTAGGATGTCGTTTCCAAACCCTAATTGCAAGCCCCATTTGCTGTCGCCGTTTCTGTACTCTACAATCGGTTACTGGGGTTCGAATCAATGGTTTCGCGTGAATCAGGGGAGAACCGTGGCCAAGGCATCGAATTGGGCTGAACAAAAGTCCCCATATGAAACTCTTGAAGTGGAAGGGGATGCTGATGAGGACCAGATAAAAAATGCTTACAGACGCTTGGCCAAATTTTATCATCCAGATGTCTATGATGGCAGAGGAAACCTTGAAGAAGGTGAAACGGCAGAAGCTAGATTCATCAAAATTCAAGCTGCTTATGAATTGCTTATAGATGGAGAGAAGCGGAGACAGTATGATATCGATAACCGGGTCAATCCTATGAAGGCATCTCAGGCATGGATGGAGTGGCTTATAAAAAAGCGAAGAGCTTTCGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCTGAACAGCAACAGCGCGAGTTAAATCTTCGTGTGCGTCAACTTTCTCGTTCAAAGACTGATCCAGATGAAGCTAGGAGGATTCTGGCAAGAGAAAAGAAGGCTTCCGCTGATTATTACTCGAATACCCTTAAAAGGCACACACTTGTACTGAAGAAGAGAGATTTGATGAGAAGAAAGGCCGAGGAAGAAAAGAAGATGACTATCAGCCGGCTCTTGGCAGCAGAAGGTCTTGAGCTTGATGATTCAGATAGTGATGAGGCACTCTAG 807 0.4535 MSNLRTLCRPQTVFSFISCRHQFRSRMSFPNPNCKPHLLSPFLYSTIGYWGSNQWFRVNQGRTVAKASNWAEQKSPYETLEVEGDADEDQIKNAYRRLAKFYHPDVYDGRGNLEEGETAEARFIKIQAAYELLIDGEKRRQYDIDNRVNPMKASQAWMEWLIKKRRAFDQRGDMAIAAWAEQQQRELNLRVRQLSRSKTDPDEARRILAREKKASADYYSNTLKRHTLVLKKRDLMRRKAEEEKKMTISRLLAAEGLELDDSDSDEAL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01549 268 PANTHER CO-CHAPERONE PROTEIN DJLA 57 261 - -
Lapu9g01549 268 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
Lapu9g01549 268 Pfam DnaJ domain 76 143 IPR001623 -
Lapu9g01549 268 PRINTS DnaJ domain signature 95 110 IPR001623 -
Lapu9g01549 268 PRINTS DnaJ domain signature 118 138 IPR001623 -
Lapu9g01549 268 PRINTS DnaJ domain signature 77 95 IPR001623 -
Lapu9g01549 268 PRINTS DnaJ domain signature 164 183 IPR001623 -
Lapu9g01549 268 FunFam Chaperone protein dnaJ 61 166 - -
Lapu9g01549 268 CDD DnaJ 76 135 IPR001623 -
Lapu9g01549 268 Gene3D DnaJ domain 60 162 IPR036869 -
Lapu9g01549 268 SMART dnaj_3 74 138 IPR001623 -
Lapu9g01549 268 SUPERFAMILY Chaperone J-domain 70 144 IPR036869 -
Lapu9g01549 268 ProSiteProfiles dnaJ domain profile. 75 146 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01549 Lapu-Chr9 29945096 29952648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01549 67 143 C2H2 Transcription Factor Family AT1G74250 37.662 1.89e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01549 - - vra:106762321 483.411