Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01538 ATGCATCACCTATCTCGGATTTTTGAGCACCGCAACCGCACCAAGGCCATGGATCGCAAGAACCCGCGGAGGAAGCCCAAGCTCGAGCGCCGCAACGCCCTCAAGTACTCCGAATACGACGCCGGATCCTCTACCTCCGACGAAACGCTCTACACGCGTTCCATGGAGTTCTACGACCGCACCAGCTTCCGAATCGAGGGCGTCGAGGGCGAATTCGATCGAATTTGTAGGAGTTTGGGCCTATCGGGCCCAGAAGACTTTTCTATTCCCGCTGCGGCCTGGGAAGCGATGAAGTTTCGTTCCTCTTCGGATATTCTCCCGAGACTGAAGCTCGAAAACCTCGATATTCCCGAGGAAGAGGAAGAGGAAGAGGACGAAGAAGAAGAAGTACCGAAGGTGAACGAGGAGAGAACACTAAAACCACCAGAGGAAGGCGAGTTGAGTAAAAAAGTCGAAGGTGGGGTTAGGGTTTTGGAGGCTGACGAATCGAGCACTGGTATTAAGGGGGCCCGTCCGCCGATGCTGAAGCCGCCACCGGGGGTGAGGGTTCAGATGGTGGATGATAGCTCGTGTTCCACGTGGGACCTTTTGAGGGATTTGGCTCCGACAGGGGAAGGGTTACCGTTGAAGTATTCAGAGCATGAGAGGGAAGTGGAGAATGTTGCTCCGCTGGGGGAAGTTGAGAGGGAAGTAGCGGAGAAGGAAGAAGGGGAAGCGGGTAGAGCGAGCCCGAAGAGGGAGGAGGAAGAGAATGTGGATAACGCAGCGAGGATTGCGGAGATCGTGGCTGGGCTTTCGGAATCGTGTTCGTTTTCCACGTCGAACGAAGATGATTCTTCCAGTAGTACCACGGATCATACCTCCAATAACATTTCTCCGCAAGGGAGAATCAAGCGGATTATTACCGCCGGAAGCTGGCAGAAGGGTGAGTTTCTTGGGGGTGGCTCGTTTGGCTCCGTTTATGAAGGAATTTCTGATGACGGATTCTTTTTTGCTGTAAAAGAAGTTTCATTGCTTGATCAGGGGACTCAGGGAAAGCAAAGTGTATATCAACTGGAGCAGGAAATAGCACTTTTGAGTCAGTTTGAGCATGACAATATTGTTCAATACTATGGCACGGAAATGGATGAGTCAAAGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGTTCCCTTAGAAGCCTCTATCAGAAGTATACTCTTCGAGATTCCCAAGTATCTGCCTATACTAGACAGATTCTGCATGGTTTGAAGTATCTTCACGATCGAAATGTGGTTCACAGGGATATCAAATGTGCAAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTTGCAGATTTTGGATTGGCCAAGGCAACCAAATTGAATGACGTTAAATCAATGAAGGGTACAGCATTGTGGATGGCCCCTGAGGTTGTGAAAGGAAAGAACATGGGTTATGGGCTTCCAGCTGATATGTGGAGTCTGGGATGCACTGTACTGGAGATGTTAACAGGCCAACTTCCGTACTGTGGTTTGGAATGTATGCAGGCATTATTTAGAATTGGAAGAGGTGTTCGACCTGCTATTCCTGACTCTCTTTCGAGAGATGCAAGCGATTTTATCCTTCAGTGCCTTCAAGTTAATCCAAACGATCGTCCCACTGCTGCTCAACTTTTAAACCATTCATTTGTCCAAAGGCCACTTTCCCAAGGCTCTGGTTCTTCATTTCCTCATGTTCTTGGCCGTAAAGGTTGA 1740 0.4908 MHHLSRIFEHRNRTKAMDRKNPRRKPKLERRNALKYSEYDAGSSTSDETLYTRSMEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFSIPAAAWEAMKFRSSSDILPRLKLENLDIPEEEEEEEDEEEEVPKVNEERTLKPPEEGELSKKVEGGVRVLEADESSTGIKGARPPMLKPPPGVRVQMVDDSSCSTWDLLRDLAPTGEGLPLKYSEHEREVENVAPLGEVEREVAEKEEGEAGRASPKREEEENVDNAARIAEIVAGLSESCSFSTSNEDDSSSSTTDHTSNNISPQGRIKRIITAGSWQKGEFLGGGSFGSVYEGISDDGFFFAVKEVSLLDQGTQGKQSVYQLEQEIALLSQFEHDNIVQYYGTEMDESKLYIFLELVTKGSLRSLYQKYTLRDSQVSAYTRQILHGLKYLHDRNVVHRDIKCANILVDASGSVKLADFGLAKATKLNDVKSMKGTALWMAPEVVKGKNMGYGLPADMWSLGCTVLEMLTGQLPYCGLECMQALFRIGRGVRPAIPDSLSRDASDFILQCLQVNPNDRPTAAQLLNHSFVQRPLSQGSGSSFPHVLGRKG* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01538 579 SUPERFAMILY Protein kinase-like (PK-like) 303 561 IPR011009 -
Lapu9g01538 579 MobiDBLite consensus disorder prediction 227 252 - -
Lapu9g01538 579 Pfam Protein kinase domain 307 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01538 579 MobiDBLite consensus disorder prediction 269 294 - -
Lapu9g01538 579 MobiDBLite consensus disorder prediction 113 150 - -
Lapu9g01538 579 SMART serkin_6 306 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01538 579 MobiDBLite consensus disorder prediction 116 131 - -
Lapu9g01538 579 Gene3D Transferase(Phosphotransferase) domain 1 304 572 - -
Lapu9g01538 579 Coils Coil 109 136 - -
Lapu9g01538 579 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 144 567 - -
Lapu9g01538 579 ProSiteProfiles Protein kinase domain profile. 306 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01538 579 FunFam Mitogen-activated protein kinase 1, putative, expressed 304 571 - -
Lapu9g01538 579 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Lapu9g01538 579 MobiDBLite consensus disorder prediction 10 31 - -
Lapu9g01538 579 MobiDBLite consensus disorder prediction 132 150 - -
Lapu9g01538 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01538 Lapu-Chr9 29821659 29829642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01538 4 563 MAP Kinase Kinase Kinase AT4G08500 48.706 2.55e-165 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu9g01538 Pkinase 8.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01538 K13414 - gmx:100819999 934.095