Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01529 ATGGATGGGAAGCCTAACCCGGATTCCTCCTCCCCGGACTTCCTCCGCCACGTTCAAGCCGCCTTGAAACGACACCGTCCACTCGGTTCAATGCAGTCCAATAGCATAAGGCCAAGGCGTACGCTGCTTCCACAGCCAAAGCTATCAAACACTCCTTCCGATCCCAGCAATTCTCAAGAACAAGCTTCTTCCAAGGTCTCACTCAACACCCTCGTCCCTTCCCAAAACCTAGACGCTCAGAAGAAAGTTCAATTTTCAGTTCACACGAATTCTGCCGCGCAGGAAATGGATTGGGTTGAAGGCAACCAAATAGAAGCGCCGTCATCATCATCATCATCATTGCTTGGATGCAACCAGAACGAGAATGTTCAGCAGGCTGGCTTTGACGGGAGTTTGAGATGTGATAGTGGAGTAAGTTCTGTGTTGCCAAAAAGAAGTGCGGTTACTCAGGATCATTTGCAGCAATTCAGTAGCTTTTTGAGTCAGCCAGCTACACAGTCTTCTGTTTTGGGACCTTCATGTGCTACAACCACCTCAGTTCATTCAACTTCGGCACCTATGCTAAATTCAACAACACGCTATTCTCACTCGCATCTAGACGGTACAAATGTGACAGCTGAGCCTTTTGGGGAGGTCAATGCTAATCCTCGTCCTGTAACTGAAGGGGTTGCGAAATCAGTTAATGTTTTCCAAAAGGAAACCAACAGAATGTTGGTGGATCGGGGGGCAGAAGCTGAAGTCCAAGCTGCTGGTTCTAGAATTGGTGATGCAGAATTGGCGTTTAAGCAGAGCAATGGAATTAAGGAGCAACAGGGGGATGTGTTAAAAGAATCTGGCAATTCTAAATATACTTGGGATGATGGTAAAGGGAAAGAGGTTGTGGATGTTGCCACTATACAACCGCAGGCTCCACTTACCACAACCACAGCCACAACCACAGTCACAACCACATCTTCAGATGTAAAGTTGGAGTCTTCTAAGGTGGAAAAACGAGAGAAGATTGCTAGTAGTAAAGGTGCATCAGCTGCCCGTAAAAGGACTTATGACCCTGATTTGTTTTTCAAAGTTAATGGGAAGCTTTATCAGCGTCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTTCACAAAGTGATTTCATCGGACTGTAGGATATATGCCCTTAAAAAGATCAAGCTCAAGGGTCGTGATTATGCTACTGCATTTGGGTTTTGTCAAGAGATTGAGTATCTGAATAGGCTGAAGGGAAAGGATAACATCATACAGCTTATAGATTATGAGGTGACTGACAAGGCATTGCTTGAGGAAGTTATGAAAGGCTCCTTCAGAAATAAAGATGGCCGGGTCAAGGTTGATGGATGTATATACATGGTACTTGAATATGGGGAAATTGATTTGGCTCACATGTTGTCTCAGAAGTGGAAGGAACTGGATGGAAGTAACCAGACCATCGACGAGAATTGGCTTCGATTTTATTGGCAGCAAATTCTTCTAGCTGTCAATACTATTCATGAGGAACGTATTGTGCACTCAGACTTGAAGCCAGCTAACTTCCTTCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGTATAGCCAAAGCAATAATGAATGACACAACCAACATTCAACGGGATTCACAGGTGGGTACACTGAGTTACATGTCTCCTGAGGCATTTATGTGTAATGAGACTGATGCTAATGGAAACATCATAAAGTGTGGCCGGTCATCAGATATCTGGTCCCTGGGTTGCATCCTTTATCAAATGGTATATGGGAGAACACCCTTTTCTGATTACAAGACATTTTGGGCCAAGTTCAAAGTGATAACAGATCCAAATCATGAAATTACGTATGAACCAGTTTCAAACCCATGGCTTTTGGATCTTATGAAGAGGTGTCTAACATGGGATCGCAATCAAAGGTGGAGAATACCTCAGCTACTCGAACATCCATTTCTTGTTCCTCCTGTACCATCTCATCCGTTATTGCCCCAAGATCATAATAGCTGTAAATTGTTAGAACATATTTCTGAAACTTGTACATATGACCCAGAAGTATCTCAACTGTGTAGTAAGCTCCAACGGTTTCTTAGTGATCCAGTCGATAAAACAACTTTCTCACTCAATTCACGAGATCAACAACTAAAACTGCTGTCCCAAATGTCAGAGCTATGTATTCAGCTGCATGAACGTTTGACAAATACTGAAAACAAGTAG 2220 0.4351 MDGKPNPDSSSPDFLRHVQAALKRHRPLGSMQSNSIRPRRTLLPQPKLSNTPSDPSNSQEQASSKVSLNTLVPSQNLDAQKKVQFSVHTNSAAQEMDWVEGNQIEAPSSSSSSLLGCNQNENVQQAGFDGSLRCDSGVSSVLPKRSAVTQDHLQQFSSFLSQPATQSSVLGPSCATTTSVHSTSAPMLNSTTRYSHSHLDGTNVTAEPFGEVNANPRPVTEGVAKSVNVFQKETNRMLVDRGAEAEVQAAGSRIGDAELAFKQSNGIKEQQGDVLKESGNSKYTWDDGKGKEVVDVATIQPQAPLTTTTATTTVTTTSSDVKLESSKVEKREKIASSKGASAARKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCRIYALKKIKLKGRDYATAFGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSFRNKDGRVKVDGCIYMVLEYGEIDLAHMLSQKWKELDGSNQTIDENWLRFYWQQILLAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMNDTTNIQRDSQVGTLSYMSPEAFMCNETDANGNIIKCGRSSDIWSLGCILYQMVYGRTPFSDYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLTWDRNQRWRIPQLLEHPFLVPPVPSHPLLPQDHNSCKLLEHISETCTYDPEVSQLCSKLQRFLSDPVDKTTFSLNSRDQQLKLLSQMSELCIQLHERLTNTENK* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01529 739 MobiDBLite consensus disorder prediction 28 66 - -
Lapu9g01529 739 FunFam serine/threonine-protein kinase mph1 isoform X2 354 441 - -
Lapu9g01529 739 Gene3D Phosphorylase Kinase; domain 1 354 440 - -
Lapu9g01529 739 MobiDBLite consensus disorder prediction 24 66 - -
Lapu9g01529 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Lapu9g01529 739 PANTHER MIXED LINEAGE PROTEIN KINASE 43 687 - -
Lapu9g01529 739 SMART serkin_6 361 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01529 739 Gene3D Transferase(Phosphotransferase) domain 1 475 656 - -
Lapu9g01529 739 Pfam Protein kinase domain 361 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01529 739 SUPERFAMILY Protein kinase-like (PK-like) 355 666 IPR011009 -
Lapu9g01529 739 ProSitePatterns Protein kinases ATP-binding region signature. 367 389 IPR017441 GO:0005524
Lapu9g01529 739 CDD PKc_Mps1 359 654 IPR027084 -
Lapu9g01529 739 FunFam serine/threonine-protein kinase mph1 isoform X1 475 657 - -
Lapu9g01529 739 ProSiteProfiles Protein kinase domain profile. 361 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01529 Lapu-Chr9 29693150 29697426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01529 367 655 MAP Kinase Kinase Kinase AT4G08470 29.000 7.20e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Lapu9g01529 Pkinase 6.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01529 K08866 - gmx:100780144 1170.61