Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01515 ATGGAAATAGACATGGACACGGACATGGATGCTATCCACCACCTTCACTTCTCTGAATACACAACCATCACCAACACCACCCCCTCTTCCGACGACGACTACGGCTGCAACTGGAACCACTGGTCCCCCCTCGTCAACTGGGACTCCTTCACCGGATCCCACGATGACTTCCACCACCTCATCGACTCCATCGTCTCCGACGGTGCCGCCGCCGAGTACCCCAGCCCTGACGACCACGCCGCCAGCAATTCCCCCTCCGCCTCTATAACGGAGGAAGACGACGCCGAGGAAGAAACCCCCGCCGCCGACGATTCTAAGGGCCTGAGACTAGTCCATCTCCTCATGGCCGCCGCGGAGGCCCTCACCGGCGCCACCAAGAGTCGCGACCTGGCTCGAGTGATATTGGTTCGGCTCAAGGAGTTGGTGTCCCACGCGCCGCACGGCTCCAACATGGAGAGGCTCGCCGCGTACTTCACCGACGCACTCCAGGGCCTGCTAGAAGGCGCCGGGGGTGCGAACAACAACAGCAAACATCACTACTATACCACGTGTGGGTCCCACCACCCCCGCGACGATCATCATCATCATCATCAAAACGACACCCTCGCGGCGTTCCAACTGCTCCAGGACATGTCTCCCTACGTCAAGTTCGGACACTTCACCGCCAACCAGGCCATCATCGAGGCTGTGGCCCACGAGCGCCGAGTCCACATCGTAGACTACGACATCATGGAAGGGGTCCAGTGGGCCTCTCTCATGCAGGCCCTCGCCTCCAACAAAACAGGTCCACCGGGTCCACACCTCCGAATCACGGCATTGTCCCGAACCGGCACTGGACGCCGCTCAATCGCCACCGTGCAGGAGACAGGGCGCCGGTTGACGGCGTTCGCCGCCTCCCTTGGCCAGCCGTTCACGTTCCACCAGTGCAGGTTGGACCCCGACGAAACGTTTAAACCTTCGTCTCTGAAGCTGGTTCGCGGAGAGGCTTTGGTTTTTAACTGCATGTTAAACTTACCGCACCTGAGTTACCGCACGCCCGATTCGGTTGCGTCGTTTTTGAGTGGAGCGAAAGAGTTGAAGCCTAGGCTGGTGGCTTTAGTGGAGGAGGAGGAGGTGGGGTCTAGTGTGGGAGGGTTCGTGGGAAGGTTCATGGACTCCCTGCATCACTACTCCGCGGTGTTTGACTCGCTGGAGGCTGGGTTTCCGATGCAGGGACGTGCCAGAGCACTTGTGGAGCGGATTTTCTTGGGCCCAAGAATAGTGGGCTCGCTGGCCCGGATATACCGGACGGGTGAAGAGCTGAAAGAGAGAGGGTCGTGGGGGGAGTGGTTGGGTGCGGCGGGGTTCAGGGGAGTCCCGATGAGCTTCGCCAATCATTGCCAAGCGAAGCTTCTACTGGGTCTTTTCAACGACGGATATCGGGTGGAGGAGGTGGGGACTAACAAGTTGGTGTTGGATTGGAAATCTCGGCGCTTGCTTTCTGCCTCACTTTGGGCTTCTTCCTCGGACTCCCATTAA 1518 0.5935 MEIDMDTDMDAIHHLHFSEYTTITNTTPSSDDDYGCNWNHWSPLVNWDSFTGSHDDFHHLIDSIVSDGAAAEYPSPDDHAASNSPSASITEEDDAEEETPAADDSKGLRLVHLLMAAAEALTGATKSRDLARVILVRLKELVSHAPHGSNMERLAAYFTDALQGLLEGAGGANNNSKHHYYTTCGSHHPRDDHHHHHQNDTLAAFQLLQDMSPYVKFGHFTANQAIIEAVAHERRVHIVDYDIMEGVQWASLMQALASNKTGPPGPHLRITALSRTGTGRRSIATVQETGRRLTAFAASLGQPFTFHQCRLDPDETFKPSSLKLVRGEALVFNCMLNLPHLSYRTPDSVASFLSGAKELKPRLVALVEEEEVGSSVGGFVGRFMDSLHHYSAVFDSLEAGFPMQGRARALVERIFLGPRIVGSLARIYRTGEELKERGSWGEWLGAAGFRGVPMSFANHCQAKLLLGLFNDGYRVEEVGTNKLVLDWKSRRLLSASLWASSSDSH* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01515 505 ProSiteProfiles GRAS family profile. 101 499 IPR005202 -
Lapu9g01515 505 Pfam GRAS domain family 110 498 IPR005202 -
Lapu9g01515 505 MobiDBLite consensus disorder prediction 71 104 - -
Lapu9g01515 505 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 93 494 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01515 Lapu-Chr9 29582861 29584694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01515 78 500 GRAS Transcription Factor Family AT5G41920 35.529 2.01e-57 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu9g01515 GRAS 4e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01515 - - gmx:100787926 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01515 9 29582861 29584694 Lapu9g01515 9 29582861 29584694 ECH