Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01509 ATGGTTAAGTCAGAGCAAAAGATCAAAACAGAACCATCATCAAAGGCAATGCGGTCTATATCCTCATTATCAGCATCAACACCAGCACCAGCATCAGATAGCAAGAAGAGGAAGTACAAGGGAGTGAGAATGAGGAGCTGGGGGTCATGGGTTTCAGAGATCAGAGCACCAAACCAGAAAACAAGAATATGGTTAGGCTCTTATTCAACCCCAGAGGCTGCAGCGAGAGCCTATGACGCAGCACTTCTATGCCTCAAAGGCTCCTCGGCAAATCTTAATTTCCCTTTAAGCTCTTCACAATATATTCCTGGAGATGCTGTCATGTCCCCCAAATCAATCCAAAGATTTGCTGCAGCTGCTGCAAATAGTTTCATTGATAATGCTCCCGTTCCCCATTCTGCATCTCCAGCTTCAACCTCATCATCATCATTGGTCTCATCCTCCTCAATGGCCTCTTCTCCTTCGGATCAAGTCGATGACGGTGCCTCACTGATATCGTCTTTGGAAGCCTACACTAATTGTGATCAAGCAAATGAATCAATGGCTATGAATGTGATGGAACCTTGGTACACTTTTGGCGATCTTCAATACCCCAAGTACGTTGATCAAATGTTAAGTGGTGCTTTCTTTGATGTTGATTCGTCCCATCTGCTTGATGATCTATACGAAGAAAGCGACATTCGTTTGTGGAGCTTCTGCTAA 702 0.4444 MVKSEQKIKTEPSSKAMRSISSLSASTPAPASDSKKRKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPLSSSQYIPGDAVMSPKSIQRFAAAAANSFIDNAPVPHSASPASTSSSSLVSSSSMASSPSDQVDDGASLISSLEAYTNCDQANESMAMNVMEPWYTFGDLQYPKYVDQMLSGAFFDVDSSHLLDDLYEESDIRLWSFC* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01509 233 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Lapu9g01509 233 Pfam AP2 domain 38 87 IPR001471 GO:0003700|GO:0006355
Lapu9g01509 233 CDD AP2 38 97 IPR001471 GO:0003700|GO:0006355
Lapu9g01509 233 Gene3D AP2/ERF domain 37 97 IPR036955 GO:0003700|GO:0006355
Lapu9g01509 233 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Lapu9g01509 233 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Lapu9g01509 233 FunFam ethylene-responsive transcription factor ERF014-like 37 97 - -
Lapu9g01509 233 SUPERFAMILY DNA-binding domain 38 97 IPR016177 GO:0003677
Lapu9g01509 233 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
Lapu9g01509 233 MobiDBLite consensus disorder prediction 136 160 - -
Lapu9g01509 233 MobiDBLite consensus disorder prediction 13 31 - -
Lapu9g01509 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 22 173 - -
Lapu9g01509 233 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01509 Lapu-Chr9 29506527 29507228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01509 1 232 AP2-EREBP Transcription Factor Family AT1G21910 46.000 2.23e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu9g01509 AP2 4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01509 - - pvu:PHAVU_009G123300g 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01509 9 29506527 29507228 Lapu9g01509 9 29506527 29507228 ECH