Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01495 ATGGAGATGGACACCACTGTCATGGACTGCAGTCCTTCCTCCAATGCCGCCCTGCCCCGCCGGAGTGGTCGCCGGAAGCTGGTTCAATCCACGCTCTTCCGTCTCAAGCCATCGGAGCCCGCTGTGAAGAATGATAAAGAGGATGAACGCGACCAGGATTACTCTGAGGGTGAGAATAACAAAAAGAAGAGGAAGAGGTCCAAGGCAAAAGCCACTCCTCCAAAAAAAGGTTCTTCTAAGAGTGTCACGCCAAAGAAAAAGGCAACTCCTAATGGTGCTAAGGGTTTAACTTCGGGGAAGGTGTTGGCTAATTCCGATCAGGTTAAGGCACCCGTGCGTAATTTGTTTCTACAAGCGAAATTGTCTGCTGAGGAAGATTCCAGGATGTATGCAGGACGTCAGATACATCCATTTTTTTCATTATGGAAGGAAGGAAAAAAAGCTCATGATGTGAGTGAGTCAAGAAGTGATTTACCAACTTCTAAGAGTAAGCGTAAAAGGACTACCTGTGGCCCTATTCATGTATTTGAAAATGTTCAGGATGATACCTCATTCGTTGACTGGAAAAAATGGACGTTTATGGAGGATACTGCCTCTATGCACTATGATCAAGAGAGTTTGAATTCATCTTTTTTAGAGCGTTCTGTTGAATCCTTAAATTTTGATAAGCTTCATGGTTCTTTGAATCCATCAGGCGTTTCAATTTCTCAGAATGCCTTTTCTTCAGATAGACTTTCTATAATTCCAACAAATCTGGGAGGAGTATCACCATCGAGCTCAGCTTCACTAGCAGAGCAAACAGCATGTCTGACGCGTGAAAATTCCGAACTGGACTTGGAGGTGGATGAATCTGTTACTACAACTGTGCAAGCTGACAATTTTAGAAAATCAAAAGATACTGAACCGCCAAGTAGATTTCTTCAAGAAAGTATGAGATCATACTGCTGTAGTTGTGTAGATATGGAGGAGTGCAACTTGTGGACATACAAATACAAGCCAACAAAGGCTGTTGAGGTATGTGGTAATGATGAATCTGTAAATATCTTGAGTGACTGGCTACATCAATGGCATGAAAGGCGATATAAAAGTAGGAAGGATAACATTGACATGGATAAAAGTGACATGCAAGATGTTGAAGACGAAGATGATGATTATAAATGTTCTAATAGTGACTATGATTCTGAAGATATAAATGAGAAGGATTCCCTGCAAAAAGTTCTTTTAATTACAGGACCAATTGGGAGTGGCAAGTCTTCAGCAGTCTATGCCTGTGCCAAAGAGCAAGGGTTTACTATTTTAGAGATCAATTCATCACATTCTAGAAATGGGACTGCTATCAGGAACTTGGAAGATCCTCTTACTTCACTTGGGTTCAAAAGGCAATCAAGAAACAATGCGAGTTCACATGAGAACTTTACAAAATTGTCCCAAGCTTCGGCTATTCTCAGTGGTACAGCTGCCAATGAGACGAATGGAGTGGATGAACTGGTAACCATAACTGATGATGAAGTTCATGGCCCTAGTGGATCAACATTAAAGTTACATGGTGAAAATGATGATGCTGAAAATTATAAAGTCCATCCTCTAGTTCTAGTTGAGGACGTGGACATCCTTTTCGCCGAAGATCGTGGATGTATTGCTGCCATACAACAGATTGCTGAGACTTCAAAGGGGCCAATTATATTGACCAGTAATAGTGATAATCCTGGTCTGCCACCTAAGTTTGATATGCTTCATGTTCCATTTGTGTTGCCATCGCCAAAGGAGTTGCTTTGCCATTTGAACACTGTTTGTCTCACTGAAGGAATCAACATCCATCCTCTTTTACTGGAGAAGTTTATACAGTCTTGTGATGGAGATATCCGAAAATCCATTATGCAACTCCAATTCTGGTTTCAGAGTAAAACATTTCAAAAAGATGAAAAAGCACAAACAGGTTATGGCTCACTTCCATTTGATCGTGAGCTTGGCCATCAGATTCTACCGAAGATAATGCCCTGGGGTTTTCCCTCAATGATATGTGAACTAATTGAGAATGAAATAACCAAACCGACAAATTTAATGGAAGAAAACTCCAAAGGGTTAGTTACAGAAGAGCTTCACGTAAGTGAACCGCGTAAAGATTTAAACTTGAAGTATATGGAGACTGATGATATAGAGGCCAAGAAGGTGGAGATGATTAAGAGGAACGGATCGTTGACAGATTACTATGAACTTGAAATTCAATGTAGCGCTATTTCTGAGTTTTCCAATTCTTCTGGTTCCCCACTTGCGCCCTCTAGGCATAATGGTCGTAGGAAACTTGTAGTAATGTCCTCTGAGTCTGAGGACGAGGATTCAAATAATGGATATCCTGTGGTCTCCCATGATGAAGCTAATACGAGACAACTGATGAAAGAAAATGATGGTTGTCCATCAGAGTCTCAATTACATGGAAACTACCCGGACATATCAGTTCCCAGACTAGTTTGTTCAGATTTGGAGCATTCAGAGGAGGAATATTTTAAATATTCAGAAACGGCTGATGTTACATACTTAAATGAAACATGTAAATCACTAGATGTATCATGTGTGCCAGAATCAACGTTCGTTCCTGAAACTGAAATTGAAAATGGAACAGAGACAATGTCTGGAGCCGTGTCTTCTGGTCCTCTTGGTAGTCTTCGAGAAGTATCTGTGAATGATGAGTTGAAACCATTCACTTTCAATGTTCGTCGGCGCTTAACAAAGTTGTCACAGAATCCAGATTTTTTGGCGGATACTGAAATTCCAGACCATTCTCTTGGAGGGGTTCAGCATGATGTTCAAGATGAACGTATGGAAACAATTGTTAAAGTGATGGATGAGTGCAGTCGAATGGATTTCAAACTAAAGCCAACATTGTCGCAGCCCAATCCATTAGACGAGACAGAAAAGATACAAAACGTATGGAGAGATCTCCGTGATCGTCGAATGGATTTAAGACGGCATTCTATCTCTGAACAGCTTGGTGCTTTTCAAGTTGTTAAACTTGCTAGTGGAATGTGCAATCTAATTTCAGAAGCTGACTTGTTTCCTAGACGGGATATAATGGAACCTTCAACGTTCCTTTCTGATGAAGCCGCATCGAATGGGTATTGTGAACAAATGATGTCCACTGTTGCTGAGCATGGGTTTTGCTTTTACGCTAAGCTTATAGCGGATGAAGGATCAAAGTTGGGTTGTGAAAATTGTGGTGATATTACTTCTGAGATGTTGGCTTCATCCACTGATATTATGGCATTGGGGAAACTATCCCGCCAGGATCTTACGAAAATGAAAATTTTCCATACTGGAAATGAAGTAGAGTGGAACACCCCAATAAATAATACGCAGAAGAGTGAAAAGAAAACATCTCTGATCGAGGTAGTCCAATCCATTGCTCCTGCAAGAACATCCTTGGCATTAAAAGGTTATGCGTTCAACGAATATCTATCTTCATTACGCCAAATTTCAAGGTCTGAAGCTTTCCGAATTTCACAAGAGGTTGAAAAGAAGAGAGGAAGAAGGGTACGGGGCGTTCACCATTACTTGAGCACATGTACCAAGTTGTCTCCAGAGGATATATCTTTGGTGACCGATGGTGATCTGTACAGAAAGATTTCTTCCCAACATACTTGA 3639 0.4095 MEMDTTVMDCSPSSNAALPRRSGRRKLVQSTLFRLKPSEPAVKNDKEDERDQDYSEGENNKKKRKRSKAKATPPKKGSSKSVTPKKKATPNGAKGLTSGKVLANSDQVKAPVRNLFLQAKLSAEEDSRMYAGRQIHPFFSLWKEGKKAHDVSESRSDLPTSKSKRKRTTCGPIHVFENVQDDTSFVDWKKWTFMEDTASMHYDQESLNSSFLERSVESLNFDKLHGSLNPSGVSISQNAFSSDRLSIIPTNLGGVSPSSSASLAEQTACLTRENSELDLEVDESVTTTVQADNFRKSKDTEPPSRFLQESMRSYCCSCVDMEECNLWTYKYKPTKAVEVCGNDESVNILSDWLHQWHERRYKSRKDNIDMDKSDMQDVEDEDDDYKCSNSDYDSEDINEKDSLQKVLLITGPIGSGKSSAVYACAKEQGFTILEINSSHSRNGTAIRNLEDPLTSLGFKRQSRNNASSHENFTKLSQASAILSGTAANETNGVDELVTITDDEVHGPSGSTLKLHGENDDAENYKVHPLVLVEDVDILFAEDRGCIAAIQQIAETSKGPIILTSNSDNPGLPPKFDMLHVPFVLPSPKELLCHLNTVCLTEGINIHPLLLEKFIQSCDGDIRKSIMQLQFWFQSKTFQKDEKAQTGYGSLPFDRELGHQILPKIMPWGFPSMICELIENEITKPTNLMEENSKGLVTEELHVSEPRKDLNLKYMETDDIEAKKVEMIKRNGSLTDYYELEIQCSAISEFSNSSGSPLAPSRHNGRRKLVVMSSESEDEDSNNGYPVVSHDEANTRQLMKENDGCPSESQLHGNYPDISVPRLVCSDLEHSEEEYFKYSETADVTYLNETCKSLDVSCVPESTFVPETEIENGTETMSGAVSSGPLGSLREVSVNDELKPFTFNVRRRLTKLSQNPDFLADTEIPDHSLGGVQHDVQDERMETIVKVMDECSRMDFKLKPTLSQPNPLDETEKIQNVWRDLRDRRMDLRRHSISEQLGAFQVVKLASGMCNLISEADLFPRRDIMEPSTFLSDEAASNGYCEQMMSTVAEHGFCFYAKLIADEGSKLGCENCGDITSEMLASSTDIMALGKLSRQDLTKMKIFHTGNEVEWNTPINNTQKSEKKTSLIEVVQSIAPARTSLALKGYAFNEYLSSLRQISRSEAFRISQEVEKKRGRRVRGVHHYLSTCTKLSPEDISLVTDGDLYRKISSQHT* 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01495 1212 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 19 1210 IPR004582 GO:0006281
Lapu9g01495 1212 MobiDBLite consensus disorder prediction 373 389 - -
Lapu9g01495 1212 Gene3D - 585 647 - -
Lapu9g01495 1212 MobiDBLite consensus disorder prediction 1 102 - -
Lapu9g01495 1212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 325 633 IPR027417 -
Lapu9g01495 1212 MobiDBLite consensus disorder prediction 39 62 - -
Lapu9g01495 1212 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 587 648 - -
Lapu9g01495 1212 Gene3D - 325 576 IPR027417 -
Lapu9g01495 1212 MobiDBLite consensus disorder prediction 371 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01495 Lapu-Chr9 29323545 29334567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01495 327 630 Core DNA Replication Machinery Family AT5G22010 23.871 1.11e-10 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01495 K26118 - gmx:100784209 1654.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01495 9 29323545 29334567 Lapu9g01495 9 29323545 29334567 ECH