Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01486 ATGGCAGTGGGAAAGAACAAGAGGATATCGAAGGGGAAGAAGGGTGGCAAGAAGAAGGCCGCTGATCCTTTTACCAAGAAGGATTGGTACGACGTCAAGGCTCCTTCTGTGTTTCAGGTCAAGAATGTTGGCAAGACTCTCGTCACTCGTACTCAGGGCACCAAGATTGCTTCGGATGGACTCAAACATCGAGTGTTTGAGGTCTCATTGGCTGATCTTCAAGGTGACGAGGACCATGCGTTCAAGAAGATTCGTTTGAGGGCTGAGGATGTTCAAGGGAAAAATGTTCTGACGAACTTCTGGGGAATGGATTTCACAAATGACAAGTTGAGGTCATTGGTGCGAAAATGGCAAACATTAATCGAGGCTCATGTGGATGTGAAAACCACTGATAATTATACTTTGAGGGTGTTCTGCATTGGGTTTACTAAGAGGCGTAGTAACCAGGTGAAGAGGACCTGTTATGCACAATCGAGCCAAGTTAGACAGATTCGAAGGAAGATGAGGGAGATAATGGTCAACCAAGCAACATCCTGCGATTTGAAAGAACTGGTTCGTAAGTTCATCCCTGAGATGATTGGAAAAGAGATTGAGAAGGCAACATCTAGTGTCTATCCTCTACAGAATGTGTTTATTCGTAAAGTTAAGATCCTGAAAGCTCCGAAGTTTGATCTAGGGAAACTGATGGAGATTCATGGGGATTACTCAGAAGACGTTGGTACAAAAGTGGAAAGGCCTGTTGACGAAACAACGGTTGAGGGAGCCACCGAAGTAGTTGGTGCTTGA 786 0.4504 MAVGKNKRISKGKKGGKKKAADPFTKKDWYDVKAPSVFQVKNVGKTLVTRTQGTKIASDGLKHRVFEVSLADLQGDEDHAFKKIRLRAEDVQGKNVLTNFWGMDFTNDKLRSLVRKWQTLIEAHVDVKTTDNYTLRVFCIGFTKRRSNQVKRTCYAQSSQVRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATSSVYPLQNVFIRKVKILKAPKFDLGKLMEIHGDYSEDVGTKVERPVDETTVEGATEVVGA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01486 261 MobiDBLite consensus disorder prediction 1 21 - -
Lapu9g01486 261 Pfam Ribosomal S3Ae family 16 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Lapu9g01486 261 MobiDBLite consensus disorder prediction 1 15 - -
Lapu9g01486 261 SMART Ribosomal_S3Ae_2 15 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Lapu9g01486 261 ProSitePatterns Ribosomal protein S3Ae signature. 61 73 IPR018281 GO:0003735|GO:0005840|GO:0006412
Lapu9g01486 261 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 250 - -
Lapu9g01486 261 Hamap 40S ribosomal protein S1 [RPS3A]. 1 258 IPR027500 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01486 Lapu-Chr9 29244989 29247040 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01486 1 261 Cytoplasmic Ribosomal Protein Gene Family AT3G04840 82.824 2.65e-160 443