Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01483 ATGGCATCGGAGCTTCAATTGCCCCCAGGCTTCAGATTCCATCCAACGGACGAGGAGCTCGTCATGCACTATCTCTGCCGCAAATGCGCGTCGCAGCCCATCGCCGTTCCCATCATCGCCGAAATCGACCTCTACAAATACGACCCTTGGGACCTTCCTGGATTGGCTTCTTATGGTGAGAAAGAGTGGTACTTCTTTTCACCACGGGACCGGAAGTACCCGAACGGCTCGAGGCCGAACCGGGCGGCGGGAACCGGTTACTGGAAGGCAACCGGGGCGGATAAGCCCATTGGTCACCCGAAGGCGGTTGGGATCAAGAAAGCGTTGGTGTTTTACGCTGGAAAAGCTCCGAAAGGGGACAAAACCAATTGGATCATGCACGAGTATCGTCTGGCTGATGTAGATCGCTCCGTTCGCAAAAAGAACAGCCTAAGGGTATATTTGGATGATTGGGTGCTGTGCCGTATTTACAACAAGAAGGGCACGATCGAGAAATTACAACCCAGCAGCGACGTTGTTGCGAGCCGGAAAATCGACTCGCCGGAGATCGAAGAGAAGAAGCCGGTGATTCTGAAAAGCGGAGGAGGTCTCCCACCGGCGCCGGCGATGACGGATTACATGTACTTCGACCCGTCGGATTCGATCCCGAAGCTGCACACGGACTCGAGCTGTTCGGAGCAGGTGGTTTCGCCGGAATTCGCGACCGAGGTGCAGAGCGAGCCGAAGTGGAACGAGTGGGAGAAGAGTCTGGAGTTCCCGTTTTACATGGATACCACTCTGAGCAACGGCTTCACCCAATTCTCGAACAATAACACCGGCACGAACAATAATAACGAGATGTCGCCGCTGCAGGACATGTTCATGTACTGGCCAAAGACCTTTTGA 885 0.5446 MASELQLPPGFRFHPTDEELVMHYLCRKCASQPIAVPIIAEIDLYKYDPWDLPGLASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKAVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRSVRKKNSLRVYLDDWVLCRIYNKKGTIEKLQPSSDVVASRKIDSPEIEEKKPVILKSGGGLPPAPAMTDYMYFDPSDSIPKLHTDSSCSEQVVSPEFATEVQSEPKWNEWEKSLEFPFYMDTTLSNGFTQFSNNNTGTNNNNEMSPLQDMFMYWPKTF* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01483 294 PANTHER NAC TRANSCRIPTION FACTOR 56 7 217 - -
Lapu9g01483 294 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Lapu9g01483 294 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Lapu9g01483 294 ProSiteProfiles NAC domain profile. 7 159 IPR003441 GO:0003677|GO:0006355
Lapu9g01483 294 FunFam NAC transcription factor 16 163 - -
Lapu9g01483 294 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01483 Lapu-Chr9 29224750 29227477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01483 1 294 NAC Transcription Factor Family AT1G01720 70.164 5.15e-144 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu9g01483 NAM 3.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01483 - - gmx:100805768 515.768