Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01478 ATGTCGAACGAGGATTCACAGACACAGAAGGTGTTTGACTCCGAAACGGCGTCGTCGCTGGTGAAGGAGTTGAGGGAGAACTTTGGTTCGAGAAGGACGCGAAGTTATGAATGGAGAGTGTCGCAGGTGAAGGCTGTCTTGAAGGCGATGGTTGATAACGAAGACCTAATCGTCGATGCTCTTCGTTCAGACCTAGCCAAGTCTTCACTCGAAACCGTCGTATACGAGATTGGTATGATTAAGAGTTCATGTGAAGAAATATTGAAGGAATTGAAAGATTGGATGAAACCAGAAAAGGTCAAAACTTCAATCAAAACTTTTCCTTCTTCAGCTGAAATAGTACCTGAACCGCTGGGTGTTGTGTTAGTCATCTCTCCATGGAACTATCCAGTTTTGTTGGCCCTTGATCCAGTTGTGGGAGCTATAGCAGCTGGCAATGCTGTGGTTTTAAAGCCATCAGAAATTGCTCCAGCCACATCATCACTACTAGCAAAACTGATAGAGAAGTATATGGATCACTCGTTTGTAAGAGTTGTCCAGGGGGCAGTTGATGAAACAACTGCACTATTGCAGCAAAAGTGGGACAAAATTTTCTACACAGGTAATGGAAAAGTTGGAAGAATAGTAATGACTGCTGCTGCAAAACACCTTACACCAGTTTTGCTGGAGCTTGGAGGAAAATCCCCCGTTGTCGTTGATTCAAATATCAACTTGCAGGTAGCAGCTAGACGAATAATTTCTGGCAAGTGGGGATTGAACAATGGACAAGCCTGCATTTCCCCCGATTATCTTATAACAACAAAAGACTATGCTCCTAAGTTGGTGGACGCCCTAAAGACTGAATTGCAGAAGTCTTACGGTGAGAATCCGTTGGAATCAGAAGATTTGTCTCGAATTGTGAGTTCCAACCACTTTGCTCGCTTGTCAAAACTCTTGAATGATGATAAGGTTTCTGGCAAGATTGTTTATGGAGGGGAAAAGGATGAAAATAAATTAAGGATTGCTCCCACTATTTTATTGGATGTTCCGCGAGATTCTCTGATAATGGGTGAGGAGATTTTCGGTCCACTGCTTCCCATCATCACGGTCAATAAACTTGAAGAAAGTCTAGATGTAATTAACTCAGGAGAGAAGGCCCTCGCTGCATATATATTTACAACCGACAAGAAATTCAAGGAGAAGTTCGTACAGAATGTTTCTGCTGGGGGTTTGCTTGTCAATGACACTACCTTACATGTCGTGGTTGATACTTTGCCATTTGGGGGAGTTGGGGAGAGTGGAATGGGTGCATACCATGGCAAGTTCTCCTTTGATGCTTTTACACACAAAAAGGCTGTTCTTTATCGCAGTTTTGCGGGTGATTCGTCATCAAGGTACCCACCATACACGGATACAAAGCAAAAATTGATGAAGGCCATCATCGCTGGTAGCATCCTTGGCATAATTCGTGCTCTTTTCGGATGGTCCTAA 1470 0.434 MSNEDSQTQKVFDSETASSLVKELRENFGSRRTRSYEWRVSQVKAVLKAMVDNEDLIVDALRSDLAKSSLETVVYEIGMIKSSCEEILKELKDWMKPEKVKTSIKTFPSSAEIVPEPLGVVLVISPWNYPVLLALDPVVGAIAAGNAVVLKPSEIAPATSSLLAKLIEKYMDHSFVRVVQGAVDETTALLQQKWDKIFYTGNGKVGRIVMTAAAKHLTPVLLELGGKSPVVVDSNINLQVAARRIISGKWGLNNGQACISPDYLITTKDYAPKLVDALKTELQKSYGENPLESEDLSRIVSSNHFARLSKLLNDDKVSGKIVYGGEKDENKLRIAPTILLDVPRDSLIMGEEIFGPLLPIITVNKLEESLDVINSGEKALAAYIFTTDKKFKEKFVQNVSAGGLLVNDTTLHVVVDTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDSSSRYPPYTDTKQKLMKAIIAGSILGIIRALFGWS* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01478 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 444 IPR016162 GO:0016491
Lapu9g01478 489 PANTHER ALDEHYDE DEHYDROGENASE 15 479 IPR012394 GO:0006081
Lapu9g01478 489 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 222 229 IPR029510 GO:0016491
Lapu9g01478 489 PIRSF ALDH 2 484 IPR012394 GO:0006081
Lapu9g01478 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 226 426 IPR016163 GO:0016620
Lapu9g01478 489 Pfam Aldehyde dehydrogenase family 12 446 IPR015590 GO:0016491
Lapu9g01478 489 FunFam Aldehyde dehydrogenase 226 426 - -
Lapu9g01478 489 SUPERFAMILY ALDH-like 20 452 IPR016161 GO:0016491
Lapu9g01478 489 FunFam Aldehyde dehydrogenase 25 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01478 Lapu-Chr9 29190859 29195843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01478 12 489 Aldehyde Dehydrogenase Gene Family AT4G34240 62.343 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01478 K00128 - gmx:100783726 843.573