Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01473 ATGGAGTTTGTGGATACCAGAAAACTACAGTTACAACAACAACATCTGCAACAACAGCCGCAACCGCAGGAGCAACATTTTCATGTGTTGGCAGTGGACGACAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTCCTAAGAGGTTCTTCATGCAAAGTTACCTGCGTGGACTCTGGAGACAAGGCTTTGAAATATCTTGGATTGGTTGATGACCTTCATGATACTACTTCTTCTACCTCTTTGGAATCATCATCTTCTCCTCCACCTCAACCATTGCAGCAAGAGGAGGGAATCAAAGTGAATTTGATCATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTACTCAGACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCCGTCGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTGGAAGGAGGGGCAGAAGAGTTTCTGTTGAAGCCTCTTCAGTTATCGGATTTGGATAAGCTTCAGTCATACTTTCTGAAATCCCTTGAAAACTCTTGTGAAAAAGAATCTGCTAACAGTTCCATAGATTCTGAGAACGAGAATGTGATTATTAACATCAGTAACAGTAACCATAATAATAACAGTATTAGCAAAAGGAAGGCCATATCTGCAGAGTCTCATCAGGATAGATCAAGACCCAAAATGAAAGAGTTGGCTGTGGTGTAA 705 0.4184 MEFVDTRKLQLQQQHLQQQPQPQEQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLVDDLHDTTSSTSLESSSSPPPQPLQQEEGIKVNLIMTDYCMPGMSGYDLLRRVKGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLDKLQSYFLKSLENSCEKESANSSIDSENENVIINISNSNHNNNSISKRKAISAESHQDRSRPKMKELAVV* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01473 234 Gene3D - 28 233 - -
Lapu9g01473 234 SMART REC_2 27 168 IPR001789 GO:0000160
Lapu9g01473 234 MobiDBLite consensus disorder prediction 207 234 - -
Lapu9g01473 234 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 220 IPR045279 GO:0009736
Lapu9g01473 234 CDD REC_typeA_ARR 29 167 - -
Lapu9g01473 234 Pfam Response regulator receiver domain 97 165 IPR001789 GO:0000160
Lapu9g01473 234 SUPERFAMILY CheY-like 27 179 IPR011006 -
Lapu9g01473 234 MobiDBLite consensus disorder prediction 7 23 - -
Lapu9g01473 234 MobiDBLite consensus disorder prediction 76 92 - -
Lapu9g01473 234 ProSiteProfiles Response regulatory domain profile. 28 172 IPR001789 GO:0000160
Lapu9g01473 234 MobiDBLite consensus disorder prediction 1 23 - -
Lapu9g01473 234 MobiDBLite consensus disorder prediction 215 234 - -
Lapu9g01473 234 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01473 Lapu-Chr9 29124628 29128200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01473 24 232 Response Regulator Gene Family AT3G57040 45.299 6.49e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu9g01473 Response_reg 2.5e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01473 K14492 - gmx:100786187 325.479