Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01469 ATGGGCGACAAGGTGGAAACGCTAGGGAGATTAGCCCAGTGGAAAATCGACAACTTCGGACCTTCTTCCTACAAAAAATCTGACCCTTTCAAGGTCGGAATCTGGAACTGGTACCTCTACATACATCTTTTTCCGGAACCTTCTCGGGTTTCTAAGGATCAACCACCCTTTGCTCGATTCATTCTTCGAGTCTCCGATGCTGGCTCATCTCGCAGCTTTCATATTTCACCTGTTCAAGAAAAGCTGCTCAGGACACATGATGACTTTGTCTGGCCTGTGGATACTACTTTTGTTGGTCGCTTCATCATTGATGTTGAGTTTCTAGACCTGAAGATATGCTCTCGGAATGGTGAAGAAACTAGTTCTGTGTGGCCATCTGATGGAAATGTGCAATCCATTGCATCCCAAAGTAGCACTCTCCGTGGCCTCTCTCGCATGCTTGACGAGGCTGTACATGCTGACCTAACCATCACCACTGCGGATGGCTCATTGAGAGCTCATAGGGCAGTTCTTTCAGCAAGTTCTCCAGTGTTCCAGAGCATGTTTCGCCACAACCTGAAGGAAAAAGAGTCTTCTACAATCCACTTAGAAGACATGTCATTTGAATCTTGCACGGCTCTTATAAGTTTCTTGTATGGAACAATCAAGCAAGAAGATTTCTGGAAACACCGGCTTGCATTGCTTGGAGCTGCTAATAAATATGACATTGATGGTCTCAAAGACATTTGTGAGGAAAGCCTTTTGGAAGATCTTAGCACAGGAAATGTTCTTGAGATGCTAAATGAGGCTTGGTTATATCAATTGCTTAAGTTAAAGAAAGGATGTTTGGTGTTCTTGTTTCAATTTGGTAAGATACATGATGTTAAGGATGAAATGAATAATTTTTTCCAACATGCAGATAGGGAGCTAATGCTTGAGATGTTTCAGGAGGCGCTTTCTGTTGGAGATCCTAGATTAACTAATGATATAGAAAATTTATAA 981 0.4241 MGDKVETLGRLAQWKIDNFGPSSYKKSDPFKVGIWNWYLYIHLFPEPSRVSKDQPPFARFILRVSDAGSSRSFHISPVQEKLLRTHDDFVWPVDTTFVGRFIIDVEFLDLKICSRNGEETSSVWPSDGNVQSIASQSSTLRGLSRMLDEAVHADLTITTADGSLRAHRAVLSASSPVFQSMFRHNLKEKESSTIHLEDMSFESCTALISFLYGTIKQEDFWKHRLALLGAANKYDIDGLKDICEESLLEDLSTGNVLEMLNEAWLYQLLKLKKGCLVFLFQFGKIHDVKDEMNNFFQHADRELMLEMFQEALSVGDPRLTNDIENL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01469 326 PANTHER OS08G0495500 PROTEIN-RELATED 3 314 IPR044714 -
Lapu9g01469 326 ProSiteProfiles BTB domain profile. 153 212 IPR000210 GO:0005515
Lapu9g01469 326 Pfam BTB/POZ domain 145 249 IPR000210 GO:0005515
Lapu9g01469 326 CDD BTB_POZ_ZBTB_KLHL-like 152 234 - -
Lapu9g01469 326 Gene3D Potassium Channel Kv1.1; Chain A 127 280 IPR011333 -
Lapu9g01469 326 SMART BTB_4 153 251 IPR000210 GO:0005515
Lapu9g01469 326 SUPERFAMILY POZ domain 137 249 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01469 Lapu-Chr9 29050145 29053270 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lapu9g01469 BTB 2.9e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01469 K10523 - gmx:100787262 566.614