Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01463 ATGGCAAGCTTGATGCAACAGCAACCAAAGGGAGTTAATGGAGGTAGCAGCCGCATAGTAGCAGTCAATGTCACTCCCTCTAACAACCTTCCTACACCATCTCATCACGATGCCTCCTCAAATCATGAGAAGCCTGGGTGGAAAAAGTTCCTGTCATACGTAGGTCCTGGATTTCTGGTCTCCTTGGCTTACCTTGATCCTGGAAACATGGAAACTGATCTGCAAGCTGGAGCTGACCACAAATATGAGCTGCTGTGGGTAATACTTATTGGACTGGTGTTTGCGCTTATAATTCAATCCTTGGCTGCCAATCTGGGCGTAACCACTGGCAAACACCTTTCAGAATTATGTAAAGCCGAATACCCATTATTGGTGAAGTACTGCTTATGGTTATTAGCTGAGCTCGCTGTCATAGCTGCAGACATACCTGAAGATCAAAACTTGATCATGACAGTGATTGGCACAGCCTTCGCATTGAACATACTTTTCCACATCCCTGTAAGGAAGTTAGAACTGCTGATATCAGTGCTAGTTTTTGTTATGGCTGGATGTTTCTTCGGGGAAATGAGTTACGTAAAACCACCTGCATCTGGTGTAATAAAAGGAATGTTTGTGCCAAAACTCAGCGGTCATGGAGCTACAGGCGATGCTATCGCTCTTTTGGGTGCCCTTGTCATGCCGCACAACCTTTTCCTCCACTCTGCTCTGGTCCTTTCTAGAAAAGTACCCAGTTCCGTGCGTGGCATCAATGATGCATGTAGATACTTTCTCATAGAAAGTGGATTTGCACTGTTTGTGGCATTCCTAATCAATGTTGCAATGATTTCTGTGTCCGGAACTGTTTGCGCTGCTGACAATCTTTCTGCAGAAAATTCTGATCAGTGCAGCAATCTTACCCTCAATTCTGCTTCTTTCCTTCTCAAGAATGTGTTGGGGCGGTCGAGCTCTACCATTTATGCCATAGCGCTGCTAGCCTCAGGACAAAGTTCAGCCATCACTGGAACCTATGCAGGGCAATACATCATGCAGGGTTTCTTGGACATGAGGATGAAAACATGGATTAGAAACTTTATGACTAGGTGCATTGCCATAACACCTAGTCTTATTGTTTCAATCATTGGGGGTTCTCAAGGGGCTGGTCGGCTTATCATCATTGCATCGATGATACTTTCATTTGAGCTTCCATTCGCTTTAATTCCTCTCCTTAAGTTCAGCAGCAGTAGTACAAAGATGGGACCTCACAAGAATTCTATAATTATCATTGTCATCTCATGGATTCTTGGCTTGGGAATCATTGGTATCAATGTGTACTACCTTTCTACTGCCTTCGTGGGTTGGTTAATTCATAACAGTCTACCAAAAGTGGCAAATGTGTTCATTGGGATCATAGTGTTTCCTCTAATGGCACTTTATGTTGGCGCAGTAATATACCTAACCTTCAGAAAAGACACTGTTAAGACGTATATTGAGACAAAGAATGAACCAGCAATGCAAACCCACATGGAAAAGGGGTTTATGGTTAATGGTCAATTGGAGTTGAGTCAAGTTCCCTACAGAGAAGACTTGGCTGATATCCCCTTACCACCATAG 1590 0.4371 MASLMQQQPKGVNGGSSRIVAVNVTPSNNLPTPSHHDASSNHEKPGWKKFLSYVGPGFLVSLAYLDPGNMETDLQAGADHKYELLWVILIGLVFALIIQSLAANLGVTTGKHLSELCKAEYPLLVKYCLWLLAELAVIAADIPEDQNLIMTVIGTAFALNILFHIPVRKLELLISVLVFVMAGCFFGEMSYVKPPASGVIKGMFVPKLSGHGATGDAIALLGALVMPHNLFLHSALVLSRKVPSSVRGINDACRYFLIESGFALFVAFLINVAMISVSGTVCAADNLSAENSDQCSNLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDMRMKTWIRNFMTRCIAITPSLIVSIIGGSQGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIIIIVISWILGLGIIGINVYYLSTAFVGWLIHNSLPKVANVFIGIIVFPLMALYVGAVIYLTFRKDTVKTYIETKNEPAMQTHMEKGFMVNGQLELSQVPYREDLADIPLPP* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01463 529 PRINTS Natural resistance-associated macrophage protein signature 217 240 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g01463 529 PRINTS Natural resistance-associated macrophage protein signature 167 188 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g01463 529 PRINTS Natural resistance-associated macrophage protein signature 327 346 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g01463 529 PRINTS Natural resistance-associated macrophage protein signature 141 160 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g01463 529 PRINTS Natural resistance-associated macrophage protein signature 355 372 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g01463 529 PRINTS Natural resistance-associated macrophage protein signature 387 406 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g01463 529 Pfam Natural resistance-associated macrophage protein 167 417 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g01463 529 NCBIfam Nramp family divalent metal transporter 55 406 - -
Lapu9g01463 529 Hamap Divalent metal cation transporter MntH [mntH]. 35 443 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g01463 529 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 38 489 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01463 Lapu-Chr9 28999142 29002511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01463 32 528 Inorganic Solute Cotransporters AT1G15960 57.935 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01463 K21398 - gmx:100787785 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01463 9 28999142 29002511 Lapu9g01463 9 28999142 29002511 ECH